Difference between revisions of "TSS:Hg 194860.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=AF275801:0 S75895:236 S75896:261 | + | |all_trans=AF275801:0 S75895:236 S75896:261 |
|chr=chrM | |chr=chrM | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
− | |distance_to_tss= | + | |distance_to_tss=2481 |
|end=5038 | |end=5038 | ||
|end_of_center_position=5033 | |end_of_center_position=5033 | ||
− | |entrez_id= | + | |entrez_id=113219467 |
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
− | |gene_alias= | + | |gene_alias=- |
− | |gene_description= | + | |gene_description=microRNA 12136 |
− | |gene_name= | + | |gene_id=100652939 |
− | |gene_type= | + | |gene_name=MT-ND2 pseudogene 28 |
+ | |gene_source=HGNC:42129 | ||
+ | |gene_symbol=MTND2P28 | ||
+ | |gene_synonyms= | ||
+ | |gene_type=ncRNA | ||
+ | |hgnc_mgi_id=HGNC:42129 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
− | |nearest_promoter_id= | + | |nearest_promoter_id=NR_162149 |
− | |nearest_refseq= | + | |nearest_refseq=NR_162149 |
|nearest_unigene= | |nearest_unigene= | ||
− | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=5027 | |start=5027 | ||
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|tss_id=hg_194860.1 | |tss_id=hg_194860.1 | ||
|tss_score=1 | |tss_score=1 | ||
+ | |uniprot_id= | ||
}} | }} |
Latest revision as of 04:41, 17 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 5032 |
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End of the center position in the TSS region: | 5033 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | AF275801 |
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Distance: | 0 |
Num_trans: | 3 |
All_trans: | AF275801:0 S75895:236 S75896:261 |
TATA-Box annotation
Distance to TSS: | 2481 |
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Nearest PromoterID: | NR_162149 |
Entrez ID: | 113219467 |
Nearest Unigene: | |
Nearest Refseq: | NR_162149 |
Nearest Ensembl: | |
Gene Name: | MT-ND2 pseudogene 28 |
Gene Alias: | - |
Gene Description: | microRNA 12136 |
Gene Type: | ncRNA |
CpG%: | 0.015 |
GC%: | 0.368159 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |