Difference between revisions of "TSS:Hg 194873.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK026547:21 DQ600534:-98 ENST00000361624.2:-426 | + | |all_trans=AK026547:21 DQ600534:-98 ENST00000361624.2:-426 LP790408:-426 LP790409:-426 LP790410:-426 LP803414:-426 LP803415:-426 LP803416:-426 LY485905:-426 LY485906:-426 LY485907:-426 BX648054:-429 |
|chr=chrM | |chr=chrM | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=21 | |distance=21 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1154 |
|end=6391 | |end=6391 | ||
|end_of_center_position=6361 | |end_of_center_position=6361 | ||
| − | |entrez_id= | + | |entrez_id=113219467 |
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=microRNA 12136 |
| − | |gene_name= | + | |gene_id=107075141 |
| − | |gene_type= | + | |gene_name=MT-CO1 pseudogene 12 |
| + | |gene_source=HGNC:52014 | ||
| + | |gene_symbol=MTCO1P12 | ||
| + | |gene_synonyms= | ||
| + | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:52014 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_162149 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_162149 |
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=6329 | |start=6329 | ||
| Line 26: | Line 31: | ||
|tss_id=hg_194873.1 | |tss_id=hg_194873.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 04:41, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6360 |
|---|---|
| End of the center position in the TSS region: | 6361 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK026547 |
|---|---|
| Distance: | 21 |
| Num_trans: | 13 |
| All_trans: | AK026547:21 DQ600534:-98 ENST00000361624.2:-426 LP790408:-426 LP790409:-426 LP790410:-426 LP803414:-426 LP803415:-426 LP803416:-426 LY485905:-426 LY485906:-426 LY485907:-426 BX648054:-429 |
TATA-Box annotation
| Distance to TSS: | 1154 |
|---|---|
| Nearest PromoterID: | NR_162149 |
| Entrez ID: | 113219467 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162149 |
| Nearest Ensembl: | |
| Gene Name: | MT-CO1 pseudogene 12 |
| Gene Alias: | - |
| Gene Description: | microRNA 12136 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
