Difference between revisions of "TSS:Hg 196967.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GASP4= | |GASP4= | ||
| − | |all_trans=ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 | + | |all_trans=ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 NR_045864:0 NR_045863:0 NR_045862:0 NR_045861:0 AK292543:0 AK126987:0 AK096955:0 AK125041:0 ENST00000354842.4:13 BC032236:13 ENST00000445416.5:-161 BC036206:-161 |
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
|end=101485462 | |end=101485462 | ||
|end_of_center_position=101485439 | |end_of_center_position=101485439 | ||
|entrez_id=100131755 | |entrez_id=100131755 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=CXorf35 | + | |gene_alias=CXorf35{{!}}GASP4 |
| − | |gene_description= | + | |gene_description=armadillo repeat containing X-linked 4 |
|gene_id=100131755 | |gene_id=100131755 | ||
| − | |gene_name= | + | |gene_name=armadillo repeat containing X-linked 4 |
|gene_source=HGNC:28615 | |gene_source=HGNC:28615 | ||
|gene_symbol=ARMCX4 | |gene_symbol=ARMCX4 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_152583 | |nearest_refseq=NM_152583 | ||
|nearest_unigene=Hs.729062 | |nearest_unigene=Hs.729062 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=101485414 | |start=101485414 | ||
|start_of_center_position=101485438 | |start_of_center_position=101485438 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000452188.5 ENST00000455331.5 ENST00000442270.5 | + | |transcript_name=ENST00000452188.5 ENST00000455331.5 ENST00000442270.5 NR_045864 NR_045863 NR_045862 NR_045861 AK292543 AK126987 AK096955 AK125041 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_196967.1 | |tss_id=hg_196967.1 | ||
Revision as of 05:29, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101485438 |
|---|---|
| End of the center position in the TSS region: | 101485439 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000452188.5 ENST00000455331.5 ENST00000442270.5 NR_045864 NR_045863 NR_045862 NR_045861 AK292543 AK126987 AK096955 AK125041 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000452188.5:0 ENST00000455331.5:0 ENST00000442270.5:0 NR_045864:0 NR_045863:0 NR_045862:0 NR_045861:0 AK292543:0 AK126987:0 AK096955:0 AK125041:0 ENST00000354842.4:13 BC032236:13 ENST00000445416.5:-161 BC036206:-161 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NR_045863 |
| Entrez ID: | 100131755 |
| Nearest Unigene: | Hs.729062 |
| Nearest Refseq: | NM_152583 |
| Nearest Ensembl: | ENSG00000196440 |
| Gene Name: | armadillo repeat containing X-linked 4 |
| Gene Alias: | CXorf35|GASP4 |
| Gene Description: | armadillo repeat containing X-linked 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
