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Difference between revisions of "TSS:Hg 217339.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000490743.5:0 uc057lqv.1:0 BX537684:0 ENST00000471209.1:1 uc057lqw.1:1 ENST00000460199.5:-2 uc057lqu.1:-2 ENST00000245564.6:7 uc001fky.5:7 BC002535:7 ENST00000488901.5:-13 uc057lqt.1:-13 CR936872:-19 ENST00000368341.8:23 ENST00000494995.5:23 uc057lqx.1:23 uc057lqy.1:23 AK290610:-23 AK001366:23 AK297140:23 AK056128:23 AK092950:23 ENST00000482284.5:25 uc057lqz.1:25 ENST00000490642.5:26 uc057lra.1:26 CR749791:26 AK222863:26 NR_024117:-30 AB587518:31 AM393003:31 EU832296:31 EU832380:31 AK309573:31 KJ894142:31 ENST00000491308.5:36 uc057lrb.1:36 ENST00000483832.5:45 uc057lrc.1:45 NM_018116:-48 NM_001256533:-48 NM_001256532:-48 NR_046294:-48 NR_046293:-48 NR_046292:-48 NR_046295:-48 AF272833:74 ENST00000465137.5:94 uc057lrd.1:94 ENST00000473327.5:166 uc057lre.1:166 ENST00000483734.5:402 uc057lrf.1:402 AY334564:402 ENST00000478756.1:467 uc057lrg.1:467
+
|all_trans=ENST00000649846.1:0 ENST00000245564.8:0 ENST00000490743.5:0 NM_018116:0 BX537684:0 ENST00000471209.1:1 ENST00000460199.5:-2 BC002535:7 ENST00000488901.5:-13 CR936872:-19 ENST00000368341.8:23 ENST00000494995.5:23 AK290610:-23 AK001366:23 AK297140:23 AK056128:23 AK092950:23 ENST00000482284.5:25 ENST00000490642.5:26 CR749791:26 AK222863:26 NR_024117:-30 AB587518:31 AM393003:31 EU832296:31 EU832380:31 AK309573:31 KJ894142:31 ENST00000491308.5:36 ENST00000483832.5:45 NR_146908:-48 NM_001350786:-48 NM_001350777:-48 NM_001350774:-48 NM_001256532:-48 NM_001350779:-48 NM_001350781:-48 NM_001350784:-48 NM_001350776:-48 NM_001350775:-48 NM_001350773:-48 NM_001350788:-48 NM_001350778:-48 NM_001350785:-48 NM_001350789:-48 NM_001350787:-48 NM_001350783:-48 NM_001256533:-48 NM_001350772:-48 NM_001350782:-48 NR_046292:-48 NR_046294:-48 NR_046293:-48 NR_046295:-48 NR_146907:-48 NM_001350780:-48 AF272833:74 ENST00000465137.5:94 ENST00000473327.5:166 ENST00000483734.5:402 AY334564:402 ENST00000478756.1:467
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 10: Line 10:
 
|gc_percent=0.661692
 
|gc_percent=0.661692
 
|gene_alias=MSTO2
 
|gene_alias=MSTO2
|gene_description="misato family member 2, pseudogene"
+
|gene_description=misato family member 2, pseudogene
 
|gene_id=55154
 
|gene_id=55154
|gene_name="misato 1, mitochondrial distribution and morphology regulator"
+
|gene_name=misato mitochondrial distribution and morphology regulator 1
 
|gene_source=HGNC:29678
 
|gene_source=HGNC:29678
 
|gene_symbol=MSTO1
 
|gene_symbol=MSTO1
Line 22: Line 22:
 
|nearest_refseq=NR_024117
 
|nearest_refseq=NR_024117
 
|nearest_unigene=Hs.656361
 
|nearest_unigene=Hs.656361
|num_trans=56
+
|num_trans=62
 
|species=human
 
|species=human
 
|start=155610217
 
|start=155610217
 
|start_of_center_position=155610217
 
|start_of_center_position=155610217
 
|strand=+
 
|strand=+
|transcript_name=ENST00000490743.5 uc057lqv.1 BX537684
+
|transcript_name=ENST00000649846.1 ENST00000245564.8 ENST00000490743.5 NM_018116 BX537684
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_217339.1
 
|tss_id=hg_217339.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=Q9BUK6
+
|uniprot_id=A0A3B3IUD2 Q9BUK6
 
}}
 
}}

Revision as of 07:50, 17 June 2021

Basic information about the TSS


TSS ID:hg_217339.1
Species:human
Chr:chr1
TSS Classification:yes
Start:155610217
End:155610218
Strand:+
TSS Score:1
Start of the center position in the TSS region:155610217
End of the center position in the TSS region:155610218



Gene and protein annotation


Transcript_name:ENST00000649846.1 ENST00000245564.8 ENST00000490743.5 NM_018116 BX537684
Distance:0
GeneID:55154
HGNC/MGI_ID:HGNC:29678
UniProt_ID:A0A3B3IUD2 Q9BUK6
Gene_name:misato mitochondrial distribution and morphology regulator 1
Gene_symbol:MSTO1
Gene_synonyms:FLJ10504 LST005 MST misato
Gene_source:HGNC:29678



Transcript annotation


Transcript_name:ENST00000649846.1 ENST00000245564.8 ENST00000490743.5 NM_018116 BX537684
Distance:0
Num_trans:62
All_trans:ENST00000649846.1:0 ENST00000245564.8:0 ENST00000490743.5:0 NM_018116:0 BX537684:0 ENST00000471209.1:1 ENST00000460199.5:-2 BC002535:7 ENST00000488901.5:-13 CR936872:-19 ENST00000368341.8:23 ENST00000494995.5:23 AK290610:-23 AK001366:23 AK297140:23 AK056128:23 AK092950:23 ENST00000482284.5:25 ENST00000490642.5:26 CR749791:26 AK222863:26 NR_024117:-30 AB587518:31 AM393003:31 EU832296:31 EU832380:31 AK309573:31 KJ894142:31 ENST00000491308.5:36 ENST00000483832.5:45 NR_146908:-48 NM_001350786:-48 NM_001350777:-48 NM_001350774:-48 NM_001256532:-48 NM_001350779:-48 NM_001350781:-48 NM_001350784:-48 NM_001350776:-48 NM_001350775:-48 NM_001350773:-48 NM_001350788:-48 NM_001350778:-48 NM_001350785:-48 NM_001350789:-48 NM_001350787:-48 NM_001350783:-48 NM_001256533:-48 NM_001350772:-48 NM_001350782:-48 NR_046292:-48 NR_046294:-48 NR_046293:-48 NR_046295:-48 NR_146907:-48 NM_001350780:-48 AF272833:74 ENST00000465137.5:94 ENST00000473327.5:166 ENST00000483734.5:402 AY334564:402 ENST00000478756.1:467



TATA-Box annotation


Distance to TSS:30
Nearest PromoterID:NR_024117
Entrez ID:100129405
Nearest Unigene:Hs.656361
Nearest Refseq:NR_024117
Nearest Ensembl:
Gene Name:misato mitochondrial distribution and morphology regulator 1
Gene Alias:MSTO2
Gene Description:misato family member 2, pseudogene
Gene Type:pseudo
CpG%:0.11
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):