Difference between revisions of "TSS:Hg 217339.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=ENST00000490743.5:0 | + | |all_trans=ENST00000649846.1:0 ENST00000245564.8:0 ENST00000490743.5:0 NM_018116:0 BX537684:0 ENST00000471209.1:1 ENST00000460199.5:-2 BC002535:7 ENST00000488901.5:-13 CR936872:-19 ENST00000368341.8:23 ENST00000494995.5:23 AK290610:-23 AK001366:23 AK297140:23 AK056128:23 AK092950:23 ENST00000482284.5:25 ENST00000490642.5:26 CR749791:26 AK222863:26 NR_024117:-30 AB587518:31 AM393003:31 EU832296:31 EU832380:31 AK309573:31 KJ894142:31 ENST00000491308.5:36 ENST00000483832.5:45 NR_146908:-48 NM_001350786:-48 NM_001350777:-48 NM_001350774:-48 NM_001256532:-48 NM_001350779:-48 NM_001350781:-48 NM_001350784:-48 NM_001350776:-48 NM_001350775:-48 NM_001350773:-48 NM_001350788:-48 NM_001350778:-48 NM_001350785:-48 NM_001350789:-48 NM_001350787:-48 NM_001350783:-48 NM_001256533:-48 NM_001350772:-48 NM_001350782:-48 NR_046292:-48 NR_046294:-48 NR_046293:-48 NR_046295:-48 NR_146907:-48 NM_001350780:-48 AF272833:74 ENST00000465137.5:94 ENST00000473327.5:166 ENST00000483734.5:402 AY334564:402 ENST00000478756.1:467 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
Line 10: | Line 10: | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=MSTO2 | |gene_alias=MSTO2 | ||
− | |gene_description= | + | |gene_description=misato family member 2, pseudogene |
|gene_id=55154 | |gene_id=55154 | ||
− | |gene_name= | + | |gene_name=misato mitochondrial distribution and morphology regulator 1 |
|gene_source=HGNC:29678 | |gene_source=HGNC:29678 | ||
|gene_symbol=MSTO1 | |gene_symbol=MSTO1 | ||
Line 22: | Line 22: | ||
|nearest_refseq=NR_024117 | |nearest_refseq=NR_024117 | ||
|nearest_unigene=Hs.656361 | |nearest_unigene=Hs.656361 | ||
− | |num_trans= | + | |num_trans=62 |
|species=human | |species=human | ||
|start=155610217 | |start=155610217 | ||
|start_of_center_position=155610217 | |start_of_center_position=155610217 | ||
|strand=+ | |strand=+ | ||
− | |transcript_name=ENST00000490743.5 | + | |transcript_name=ENST00000649846.1 ENST00000245564.8 ENST00000490743.5 NM_018116 BX537684 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_217339.1 | |tss_id=hg_217339.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id=Q9BUK6 | + | |uniprot_id=A0A3B3IUD2 Q9BUK6 |
}} | }} |
Revision as of 07:50, 17 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 155610217 |
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End of the center position in the TSS region: | 155610218 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000649846.1 ENST00000245564.8 ENST00000490743.5 NM_018116 BX537684 |
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Distance: | 0 |
Num_trans: | 62 |
All_trans: | ENST00000649846.1:0 ENST00000245564.8:0 ENST00000490743.5:0 NM_018116:0 BX537684:0 ENST00000471209.1:1 ENST00000460199.5:-2 BC002535:7 ENST00000488901.5:-13 CR936872:-19 ENST00000368341.8:23 ENST00000494995.5:23 AK290610:-23 AK001366:23 AK297140:23 AK056128:23 AK092950:23 ENST00000482284.5:25 ENST00000490642.5:26 CR749791:26 AK222863:26 NR_024117:-30 AB587518:31 AM393003:31 EU832296:31 EU832380:31 AK309573:31 KJ894142:31 ENST00000491308.5:36 ENST00000483832.5:45 NR_146908:-48 NM_001350786:-48 NM_001350777:-48 NM_001350774:-48 NM_001256532:-48 NM_001350779:-48 NM_001350781:-48 NM_001350784:-48 NM_001350776:-48 NM_001350775:-48 NM_001350773:-48 NM_001350788:-48 NM_001350778:-48 NM_001350785:-48 NM_001350789:-48 NM_001350787:-48 NM_001350783:-48 NM_001256533:-48 NM_001350772:-48 NM_001350782:-48 NR_046292:-48 NR_046294:-48 NR_046293:-48 NR_046295:-48 NR_146907:-48 NM_001350780:-48 AF272833:74 ENST00000465137.5:94 ENST00000473327.5:166 ENST00000483734.5:402 AY334564:402 ENST00000478756.1:467 |
TATA-Box annotation
Distance to TSS: | 30 |
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Nearest PromoterID: | NR_024117 |
Entrez ID: | 100129405 |
Nearest Unigene: | Hs.656361 |
Nearest Refseq: | NR_024117 |
Nearest Ensembl: | |
Gene Name: | misato mitochondrial distribution and morphology regulator 1 |
Gene Alias: | MSTO2 |
Gene Description: | misato family member 2, pseudogene |
Gene Type: | pseudo |
CpG%: | 0.11 |
GC%: | 0.661692 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |