Difference between revisions of "TSS:Hg 219715.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BX641030:54 AK092247:355 | + | |all_trans=LF355481:-16 MA591058:-16 BX641030:54 AK092247:355 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=-16 |
|distance_to_tss=-161105 | |distance_to_tss=-161105 | ||
|end=16437418 | |end=16437418 | ||
| Line 12: | Line 12: | ||
|gene_description=chromosome 9 open reading frame 92 | |gene_description=chromosome 9 open reading frame 92 | ||
|gene_id=54796 | |gene_id=54796 | ||
| − | |gene_name= | + | |gene_name=C9orf92 |
|gene_source=HGNC:30988 | |gene_source=HGNC:30988 | ||
|gene_symbol=BNC2 | |gene_symbol=BNC2 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:30988 | |hgnc_mgi_id=HGNC:30988 | ||
|nearest_ensembl=ENSG00000205549 | |nearest_ensembl=ENSG00000205549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364979 |
|nearest_refseq=NM_001271829 | |nearest_refseq=NM_001271829 | ||
|nearest_unigene=Hs.586441 | |nearest_unigene=Hs.586441 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=16437417 | |start=16437417 | ||
|start_of_center_position=16437417 | |start_of_center_position=16437417 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF355481 MA591058 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219715.1 | |tss_id=hg_219715.1 | ||
Latest revision as of 08:16, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16437417 |
|---|---|
| End of the center position in the TSS region: | 16437418 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF355481 MA591058 |
|---|---|
| Distance: | -16 |
| Num_trans: | 4 |
| All_trans: | LF355481:-16 MA591058:-16 BX641030:54 AK092247:355 |
TATA-Box annotation
| Distance to TSS: | -161105 |
|---|---|
| Nearest PromoterID: | NM_001364979 |
| Entrez ID: | 100129385 |
| Nearest Unigene: | Hs.586441 |
| Nearest Refseq: | NM_001271829 |
| Nearest Ensembl: | ENSG00000205549 |
| Gene Name: | C9orf92 |
| Gene Alias: | Em:AL513424.1 |
| Gene Description: | chromosome 9 open reading frame 92 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
