Difference between revisions of "TSS:Hg 219820.1"
From referenceTSS
| Line 2: | Line 2: | ||
|FAC= | |FAC= | ||
|FACC= | |FACC= | ||
| − | |all_trans= | + | |all_trans=X66894:13 ENST00000375305.6:-16 NM_001243743:-16 ENST00000650176.1:305 AK310599:305 AK312548:-337 ENST00000433829.1:344 ENST00000647882.1:354 ENST00000490972.7:-433 AK222871:-433 ENST00000647778.1:-439 ENST00000649611.1:-453 BC015748:-461 X66893:-464 ENST00000289081.8:-471 ENST00000474949.1:-471 NM_000136:-471 NM_001243744:-471 AK304887:-471 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 11: | Line 11: | ||
|entrez_id=2176 | |entrez_id=2176 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=FA3 | + | |gene_alias=FA3{{!}}FAC{{!}}FACC |
| − | |gene_description= | + | |gene_description=FA complementation group C |
|gene_id=2176 | |gene_id=2176 | ||
| − | |gene_name= | + | |gene_name=FA complementation group C |
|gene_source=HGNC:3584 | |gene_source=HGNC:3584 | ||
|gene_symbol=FANCC | |gene_symbol=FANCC | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_000136 | |nearest_refseq=NM_000136 | ||
|nearest_unigene=Hs.494529 | |nearest_unigene=Hs.494529 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=95317237 | |start=95317237 | ||
|start_of_center_position=95317237 | |start_of_center_position=95317237 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=X66894 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219820.1 | |tss_id=hg_219820.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 08:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95317237 |
|---|---|
| End of the center position in the TSS region: | 95317238 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X66894 |
|---|---|
| Distance: | 13 |
| Num_trans: | 19 |
| All_trans: | X66894:13 ENST00000375305.6:-16 NM_001243743:-16 ENST00000650176.1:305 AK310599:305 AK312548:-337 ENST00000433829.1:344 ENST00000647882.1:354 ENST00000490972.7:-433 AK222871:-433 ENST00000647778.1:-439 ENST00000649611.1:-453 BC015748:-461 X66893:-464 ENST00000289081.8:-471 ENST00000474949.1:-471 NM_000136:-471 NM_001243744:-471 AK304887:-471 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001243743 |
| Entrez ID: | 2176 |
| Nearest Unigene: | Hs.494529 |
| Nearest Refseq: | NM_000136 |
| Nearest Ensembl: | ENSG00000158169 |
| Gene Name: | FA complementation group C |
| Gene Alias: | FA3|FAC|FACC |
| Gene Description: | FA complementation group C |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
