Difference between revisions of "TSS:Hg 219849.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CG-2= | |CG-2= | ||
|CG2= | |CG2= | ||
| − | |all_trans=ENST00000491854 | + | |all_trans=ENST00000491854.1:-37 AL833960:-37 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-37 | |distance=-37 | ||
| − | |distance_to_tss= | + | |distance_to_tss=11496 |
|end=109108451 | |end=109108451 | ||
|end_of_center_position=109108451 | |end_of_center_position=109108451 | ||
|entrez_id=23731 | |entrez_id=23731 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| − | |gene_alias=C9orf5 | + | |gene_alias=C9orf5{{!}}CG-2{{!}}CG2 |
|gene_description=transmembrane protein 245 | |gene_description=transmembrane protein 245 | ||
|gene_id=23731 | |gene_id=23731 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_032012 | |nearest_refseq=NM_032012 | ||
|nearest_unigene=Hs.308074 | |nearest_unigene=Hs.308074 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=109108450 | |start=109108450 | ||
|start_of_center_position=109108450 | |start_of_center_position=109108450 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000491854 | + | |transcript_name=ENST00000491854.1 AL833960 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219849.1 | |tss_id=hg_219849.1 | ||
Revision as of 08:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109108450 |
|---|---|
| End of the center position in the TSS region: | 109108451 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000491854.1 AL833960 |
|---|---|
| Distance: | -37 |
| Num_trans: | 2 |
| All_trans: | ENST00000491854.1:-37 AL833960:-37 |
TATA-Box annotation
| Distance to TSS: | 11496 |
|---|---|
| Nearest PromoterID: | NM_032012 |
| Entrez ID: | 23731 |
| Nearest Unigene: | Hs.308074 |
| Nearest Refseq: | NM_032012 |
| Nearest Ensembl: | ENSG00000106771 |
| Gene Name: | transmembrane protein 245 |
| Gene Alias: | C9orf5|CG-2|CG2 |
| Gene Description: | transmembrane protein 245 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
