Difference between revisions of "TSS:Hg 219924.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC032953:-86 AK292489:143 AY358311:155 KJ899848:157 BC112892:162 AK300287:-272 ENST00000448616.5:-304 NM_001145106:-304 ENST00000486250.5:-375 ENST00000451466.1:-376 ENST00000372338.9:-483 NM_032843:-483 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
|distance=-86 | |distance=-86 | ||
| − | |distance_to_tss= | + | |distance_to_tss=304 |
|end=130938764 | |end=130938764 | ||
|end_of_center_position=130938764 | |end_of_center_position=130938764 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:25922 | |hgnc_mgi_id=HGNC:25922 | ||
|nearest_ensembl=ENSG00000130720 | |nearest_ensembl=ENSG00000130720 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001145106 |
|nearest_refseq=NM_032843 | |nearest_refseq=NM_032843 | ||
|nearest_unigene=Hs.133205 | |nearest_unigene=Hs.133205 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=130938763 | |start=130938763 | ||
|start_of_center_position=130938763 | |start_of_center_position=130938763 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC032953 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219924.1 | |tss_id=hg_219924.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 08:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 130938763 |
|---|---|
| End of the center position in the TSS region: | 130938764 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC032953 |
|---|---|
| Distance: | -86 |
| Num_trans: | 12 |
| All_trans: | BC032953:-86 AK292489:143 AY358311:155 KJ899848:157 BC112892:162 AK300287:-272 ENST00000448616.5:-304 NM_001145106:-304 ENST00000486250.5:-375 ENST00000451466.1:-376 ENST00000372338.9:-483 NM_032843:-483 |
TATA-Box annotation
| Distance to TSS: | 304 |
|---|---|
| Nearest PromoterID: | NM_001145106 |
| Entrez ID: | 84929 |
| Nearest Unigene: | Hs.133205 |
| Nearest Refseq: | NM_032843 |
| Nearest Ensembl: | ENSG00000130720 |
| Gene Name: | fibrinogen C domain containing 1 |
| Gene Alias: | - |
| Gene Description: | fibrinogen C domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
