Difference between revisions of "TSS:Hg 220008.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BX648210:5 | + | |all_trans=ENST00000438473.6:5 BX648210:5 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=5 | |distance=5 | ||
| − | |distance_to_tss= | + | |distance_to_tss=82957 |
|end=21617129 | |end=21617129 | ||
|end_of_center_position=21617129 | |end_of_center_position=21617129 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.278607 | |gc_percent=0.278607 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195627 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=21617128 | |start=21617128 | ||
|start_of_center_position=21617128 | |start_of_center_position=21617128 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-73(TTGTTTAAAAAG,-,0.00) |
| − | |transcript_name=BX648210 | + | |transcript_name=ENST00000438473.6 BX648210 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_220008.1 | |tss_id=hg_220008.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5HYC6 | + | |uniprot_id=Q5HYC6 Q5JT35 |
}} | }} | ||
Revision as of 08:20, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21617128 |
|---|---|
| End of the center position in the TSS region: | 21617129 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000438473.6 BX648210 |
|---|---|
| Distance: | 5 |
| Num_trans: | 2 |
| All_trans: | ENST00000438473.6:5 BX648210:5 |
TATA-Box annotation
| Distance to TSS: | 82957 |
|---|---|
| Nearest PromoterID: | NM_001195627 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.278607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -73(TTGTTTAAAAAG,-,0.00) |
