Difference between revisions of "TSS:Hg 220214.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P167= | |P167= | ||
|TIF32= | |TIF32= | ||
| − | |all_trans=AK302575:-142 AB383762:-299 BC114429:-353 U58046:-397 BC054342:-404 BC033769:-407 U78311:-412 AK307610:-423 | + | |all_trans=AK302575:-142 AB383762:-299 LF346032:-301 MA581609:-301 BC114429:-353 U58046:-397 BC054342:-404 BC033769:-407 U78311:-412 AK307610:-423 D50929:-427 BC064926:-429 BC107776:-433 AK309542:-438 ENST00000369144.8:-440 NM_003750:-440 LP895213:-445 ENST00000541549.2:-446 JX312508:-446 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=-142 | |distance=-142 | ||
| − | |distance_to_tss= | + | |distance_to_tss=440 |
|eIF3-p170= | |eIF3-p170= | ||
|eIF3-theta= | |eIF3-theta= | ||
| Line 14: | Line 14: | ||
|entrez_id=8661 | |entrez_id=8661 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=EIF3 | + | |gene_alias=EIF3{{!}}EIF3S10{{!}}P167{{!}}TIF32{{!}}eIF3-p170{{!}}eIF3-theta{{!}}p180{{!}}p185 |
|gene_description=eukaryotic translation initiation factor 3 subunit A | |gene_description=eukaryotic translation initiation factor 3 subunit A | ||
|gene_id=8661 | |gene_id=8661 | ||
| Line 20: | Line 20: | ||
|gene_source=HGNC:3271 | |gene_source=HGNC:3271 | ||
|gene_symbol=EIF3A | |gene_symbol=EIF3A | ||
| − | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta | + | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:3271 | |hgnc_mgi_id=HGNC:3271 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_003750 | |nearest_refseq=NM_003750 | ||
|nearest_unigene=Hs.523299 | |nearest_unigene=Hs.523299 | ||
| − | |num_trans= | + | |num_trans=19 |
|p180= | |p180= | ||
|p185= | |p185= | ||
Revision as of 08:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119080376 |
|---|---|
| End of the center position in the TSS region: | 119080377 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK302575 |
|---|---|
| Distance: | -142 |
| Num_trans: | 19 |
| All_trans: | AK302575:-142 AB383762:-299 LF346032:-301 MA581609:-301 BC114429:-353 U58046:-397 BC054342:-404 BC033769:-407 U78311:-412 AK307610:-423 D50929:-427 BC064926:-429 BC107776:-433 AK309542:-438 ENST00000369144.8:-440 NM_003750:-440 LP895213:-445 ENST00000541549.2:-446 JX312508:-446 |
TATA-Box annotation
| Distance to TSS: | 440 |
|---|---|
| Nearest PromoterID: | NM_003750 |
| Entrez ID: | 8661 |
| Nearest Unigene: | Hs.523299 |
| Nearest Refseq: | NM_003750 |
| Nearest Ensembl: | ENSG00000107581 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 |
| Gene Description: | eukaryotic translation initiation factor 3 subunit A |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
