Difference between revisions of "TSS:Hg 223814.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NR_103556:-346 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 7: | Line 7: | ||
|end=146486708 | |end=146486708 | ||
|end_of_center_position=146486693 | |end_of_center_position=146486693 | ||
| − | |entrez_id= | + | |entrez_id=100288805 |
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias=HYDINP1 |
| − | |gene_description= | + | |gene_description=HYDIN axonemal central pair apparatus protein 2 (pseudogene) |
| − | |gene_id= | + | |gene_id=100288805 |
| − | |gene_name= | + | |gene_name=HYDIN axonemal central pair apparatus protein 2 (pseudogene) |
| − | |gene_source= | + | |gene_source=HGNC:33129 |
| − | |gene_symbol= | + | |gene_symbol=HYDIN2 |
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=pseudo |
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:33129 |
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_103556 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_049745 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.648712 |
|num_trans=1 | |num_trans=1 | ||
|species=human | |species=human | ||
| Line 27: | Line 27: | ||
|start_of_center_position=146486692 | |start_of_center_position=146486692 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NR_103556 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_223814.1 | |tss_id=hg_223814.1 | ||
Revision as of 09:06, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 146486692 |
|---|---|
| End of the center position in the TSS region: | 146486693 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_103556 |
|---|---|
| Distance: | -346 |
| Num_trans: | 1 |
| All_trans: | NR_103556:-346 |
TATA-Box annotation
| Distance to TSS: | 361 |
|---|---|
| Nearest PromoterID: | NR_103556 |
| Entrez ID: | 100288805 |
| Nearest Unigene: | Hs.648712 |
| Nearest Refseq: | NR_049745 |
| Nearest Ensembl: | |
| Gene Name: | HYDIN axonemal central pair apparatus protein 2 (pseudogene) |
| Gene Alias: | HYDINP1 |
| Gene Description: | HYDIN axonemal central pair apparatus protein 2 (pseudogene) |
| Gene Type: | pseudo |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
