Difference between revisions of "TSS:Hg 224386.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CGI-18= | |CGI-18= | ||
|SMABF2= | |SMABF2= | ||
| − | |all_trans=ENST00000470481.2 | + | |all_trans=ENST00000470481.2:22 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 11: | Line 11: | ||
|entrez_id=51008 | |entrez_id=51008 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=ASC1p50 | + | |gene_alias=ASC1p50{{!}}CGI-18{{!}}SMABF2{{!}}p50 |
|gene_description=activating signal cointegrator 1 complex subunit 1 | |gene_description=activating signal cointegrator 1 complex subunit 1 | ||
|gene_id=119504 | |gene_id=119504 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:26976 | |hgnc_mgi_id=HGNC:26976 | ||
|nearest_ensembl=ENSG00000138303 | |nearest_ensembl=ENSG00000138303 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369085 |
|nearest_refseq=NM_015947 | |nearest_refseq=NM_015947 | ||
|nearest_unigene=Hs.500007 | |nearest_unigene=Hs.500007 | ||
| − | |num_trans= | + | |num_trans=1 |
|p50= | |p50= | ||
|species=human | |species=human | ||
| Line 30: | Line 30: | ||
|start_of_center_position=72223109 | |start_of_center_position=72223109 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000470481.2 | + | |transcript_name=ENST00000470481.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_224386.1 | |tss_id=hg_224386.1 | ||
Revision as of 09:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72223109 |
|---|---|
| End of the center position in the TSS region: | 72223110 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000470481.2 |
|---|---|
| Distance: | 22 |
| Num_trans: | 1 |
| All_trans: | ENST00000470481.2:22 |
TATA-Box annotation
| Distance to TSS: | -5976 |
|---|---|
| Nearest PromoterID: | NM_001369085 |
| Entrez ID: | 51008 |
| Nearest Unigene: | Hs.500007 |
| Nearest Refseq: | NM_015947 |
| Nearest Ensembl: | ENSG00000138303 |
| Gene Name: | anaphase promoting complex subunit 16 |
| Gene Alias: | ASC1p50|CGI-18|SMABF2|p50 |
| Gene Description: | activating signal cointegrator 1 complex subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
