Difference between revisions of "TSS:Hg 224508.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000463663.6 | + | |all_trans=ENST00000463663.6:-384 ENST00000368989.6:-458 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=-384 | |distance=-384 | ||
| − | |distance_to_tss= | + | |distance_to_tss=529 |
|end=122375256 | |end=122375256 | ||
|end_of_center_position=122375237 | |end_of_center_position=122375237 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:14335 | |hgnc_mgi_id=HGNC:14335 | ||
|nearest_ensembl=ENSG00000107679 | |nearest_ensembl=ENSG00000107679 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001001974 |
|nearest_refseq=NM_021622 | |nearest_refseq=NM_021622 | ||
|nearest_unigene=Hs.643512 | |nearest_unigene=Hs.643512 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=122375217 | |start=122375217 | ||
|start_of_center_position=122375236 | |start_of_center_position=122375236 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000463663.6 | + | |transcript_name=ENST00000463663.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224508.1 | |tss_id=hg_224508.1 | ||
Revision as of 09:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 122375236 |
|---|---|
| End of the center position in the TSS region: | 122375237 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000463663.6 |
|---|---|
| Distance: | -384 |
| Num_trans: | 2 |
| All_trans: | ENST00000463663.6:-384 ENST00000368989.6:-458 |
TATA-Box annotation
| Distance to TSS: | 529 |
|---|---|
| Nearest PromoterID: | NM_001001974 |
| Entrez ID: | 59338 |
| Nearest Unigene: | Hs.643512 |
| Nearest Refseq: | NM_021622 |
| Nearest Ensembl: | ENSG00000107679 |
| Gene Name: | pleckstrin homology domain containing A1 |
| Gene Alias: | TAPP1 |
| Gene Description: | pleckstrin homology domain containing A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
