Difference between revisions of "TSS:Hg 224645.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF370706:-59 MA606283:-59 ENST00000431095.7:75 ENST00000447298.2:-108 ENST00000442037.5:164 ENST00000436715.5:-212 LF370707:-233 MA606284:-233 BC009853:-234 AK123560:-242 LC106311:-289 BC013067:-346 BC106078:367 ENST00000417089.6:-381 LF370708:-416 MA606285:-416 MB407720:-428 AB372813:-428 LF160018:-428 LP726824:-428 LP819094:-428 LP939036:-428 LQ072819:-428 LQ441148:-428 LX280753:-428 LY405562:-428 LZ234371:-428 MA260801:-428 MA646320:-428 MA734204:-428 MS833933:-428 MS834818:-428 MA803373:-428 MB406830:-428 LF160208:-463 LP727120:-463 LP819390:-463 LP939332:-463 LQ072820:-463 LQ441143:-463 LQ673013:-463 LY405561:-463 LY496320:-463 LY496766:-463 LY497013:-463 LY497420:-463 LY497638:-463 LY498022:-463 LZ234253:-463 LZ238499:-463 LZ239038:-463 MA260800:-463 MA405867:-463 MA646321:-463 MA734205:-463 MS833934:-463 MS884200:-463 MS884607:-463 MS902101:-463 MS994328:-463 MS994774:-463 MS996704:-463 MS997088:-463 MA803374:-463 MA805853:-463 MA806405:-463 MA822458:-463 LY616263:-463 LY616802:-463 LG052084:-472 LY496531:-472 LY497206:-472 LY497818:-472 LZ238758:-472 MS884393:-472 MS994539:-472 MS996884:-472 MA806128:-472 MA822797:-472 LY616522:-472 MB407223:-472 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance=- | + | |distance=-59 |
|distance_to_tss=474 | |distance_to_tss=474 | ||
|end=1996359 | |end=1996359 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=MIR675 |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=81 |
|species=human | |species=human | ||
|start=1996354 | |start=1996354 | ||
|start_of_center_position=1996356 | |start_of_center_position=1996356 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF370706 MA606283 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224645.1 | |tss_id=hg_224645.1 | ||
Latest revision as of 09:25, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1996356 |
|---|---|
| End of the center position in the TSS region: | 1996357 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF370706 MA606283 |
|---|---|
| Distance: | -59 |
| Num_trans: | 81 |
| All_trans: | LF370706:-59 MA606283:-59 ENST00000431095.7:75 ENST00000447298.2:-108 ENST00000442037.5:164 ENST00000436715.5:-212 LF370707:-233 MA606284:-233 BC009853:-234 AK123560:-242 LC106311:-289 BC013067:-346 BC106078:367 ENST00000417089.6:-381 LF370708:-416 MA606285:-416 MB407720:-428 AB372813:-428 LF160018:-428 LP726824:-428 LP819094:-428 LP939036:-428 LQ072819:-428 LQ441148:-428 LX280753:-428 LY405562:-428 LZ234371:-428 MA260801:-428 MA646320:-428 MA734204:-428 MS833933:-428 MS834818:-428 MA803373:-428 MB406830:-428 LF160208:-463 LP727120:-463 LP819390:-463 LP939332:-463 LQ072820:-463 LQ441143:-463 LQ673013:-463 LY405561:-463 LY496320:-463 LY496766:-463 LY497013:-463 LY497420:-463 LY497638:-463 LY498022:-463 LZ234253:-463 LZ238499:-463 LZ239038:-463 MA260800:-463 MA405867:-463 MA646321:-463 MA734205:-463 MS833934:-463 MS884200:-463 MS884607:-463 MS902101:-463 MS994328:-463 MS994774:-463 MS996704:-463 MS997088:-463 MA803374:-463 MA805853:-463 MA806405:-463 MA822458:-463 LY616263:-463 LY616802:-463 LG052084:-472 LY496531:-472 LY497206:-472 LY497818:-472 LZ238758:-472 MS884393:-472 MS994539:-472 MS996884:-472 MA806128:-472 MA822797:-472 LY616522:-472 MB407223:-472 |
TATA-Box annotation
| Distance to TSS: | 474 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | MIR675 |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
