Difference between revisions of "TSS:Hg 225494.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000630422.2 | + | |all_trans=ENST00000630422.2:-25 AK316392:-25 NM_001111046:274 NM_001111047:274 ENST00000440264.5:347 AK301897:381 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:1577 | |hgnc_mgi_id=HGNC:1577 | ||
|nearest_ensembl=ENSG00000133101 | |nearest_ensembl=ENSG00000133101 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001111046 |
|nearest_refseq=NM_003914 | |nearest_refseq=NM_003914 | ||
|nearest_unigene=Hs.417050 | |nearest_unigene=Hs.417050 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=36431544 | |start=36431544 | ||
|start_of_center_position=36431550 | |start_of_center_position=36431550 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000630422.2 | + | |transcript_name=ENST00000630422.2 AK316392 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_225494.1 | |tss_id=hg_225494.1 | ||
Revision as of 09:45, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 36431550 |
|---|---|
| End of the center position in the TSS region: | 36431551 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000630422.2 AK316392 |
|---|---|
| Distance: | -25 |
| Num_trans: | 6 |
| All_trans: | ENST00000630422.2:-25 AK316392:-25 NM_001111046:274 NM_001111047:274 ENST00000440264.5:347 AK301897:381 |
TATA-Box annotation
| Distance to TSS: | -280 |
|---|---|
| Nearest PromoterID: | NM_001111046 |
| Entrez ID: | 8900 |
| Nearest Unigene: | Hs.417050 |
| Nearest Refseq: | NM_003914 |
| Nearest Ensembl: | ENSG00000133101 |
| Gene Name: | cyclin A1 |
| Gene Alias: | CT146 |
| Gene Description: | cyclin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
