Difference between revisions of "TSS:Hg 225495.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000440264.5 | + | |all_trans=ENST00000440264.5:0 AK301897:34 NM_001111046:-69 NM_001111047:-69 NM_001111045:369 AK314261:369 ENST00000630422.2:-379 AK316392:-379 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:1577 | |hgnc_mgi_id=HGNC:1577 | ||
|nearest_ensembl=ENSG00000133101 | |nearest_ensembl=ENSG00000133101 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001111047 |
|nearest_refseq=NM_003914 | |nearest_refseq=NM_003914 | ||
|nearest_unigene=Hs.417050 | |nearest_unigene=Hs.417050 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=36431898 | |start=36431898 | ||
|start_of_center_position=36431900 | |start_of_center_position=36431900 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000440264.5 | + | |transcript_name=ENST00000440264.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_225495.1 | |tss_id=hg_225495.1 | ||
Revision as of 09:45, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 36431900 |
|---|---|
| End of the center position in the TSS region: | 36431901 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000440264.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000440264.5:0 AK301897:34 NM_001111046:-69 NM_001111047:-69 NM_001111045:369 AK314261:369 ENST00000630422.2:-379 AK316392:-379 |
TATA-Box annotation
| Distance to TSS: | 71 |
|---|---|
| Nearest PromoterID: | NM_001111047 |
| Entrez ID: | 8900 |
| Nearest Unigene: | Hs.417050 |
| Nearest Refseq: | NM_003914 |
| Nearest Ensembl: | ENSG00000133101 |
| Gene Name: | cyclin A1 |
| Gene Alias: | CT146 |
| Gene Description: | cyclin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
