Difference between revisions of "TSS:Hg 226205.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ACIX= | |ACIX= | ||
| − | |all_trans=ENST00000294016. | + | |all_trans=ENST00000294016.8:-43 NM_001116:-43 AJ133123:196 BC151229:354 AB011092:354 BC151207:360 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
| − | |distance= | + | |distance=-43 |
| − | |distance_to_tss= | + | |distance_to_tss=52 |
|end=4116399 | |end=4116399 | ||
|end_of_center_position=4116390 | |end_of_center_position=4116390 | ||
|entrez_id=115 | |entrez_id=115 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=AC9 | + | |gene_alias=AC9{{!}}ACIX |
|gene_description=adenylate cyclase 9 | |gene_description=adenylate cyclase 9 | ||
|gene_id=115 | |gene_id=115 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001116 | |nearest_refseq=NM_001116 | ||
|nearest_unigene=Hs.391860 | |nearest_unigene=Hs.391860 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=4116380 | |start=4116380 | ||
|start_of_center_position=4116389 | |start_of_center_position=4116389 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000294016. | + | |transcript_name=ENST00000294016.8 NM_001116 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_226205.1 | |tss_id=hg_226205.1 | ||
Revision as of 10:01, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4116389 |
|---|---|
| End of the center position in the TSS region: | 4116390 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000294016.8 NM_001116 |
|---|---|
| Distance: | -43 |
| Num_trans: | 6 |
| All_trans: | ENST00000294016.8:-43 NM_001116:-43 AJ133123:196 BC151229:354 AB011092:354 BC151207:360 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_001116 |
| Entrez ID: | 115 |
| Nearest Unigene: | Hs.391860 |
| Nearest Refseq: | NM_001116 |
| Nearest Ensembl: | ENSG00000162104 |
| Gene Name: | adenylate cyclase 9 |
| Gene Alias: | AC9|ACIX |
| Gene Description: | adenylate cyclase 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
