Difference between revisions of "TSS:Hg 226525.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000521575.1 | + | |all_trans=ENST00000521575.1:-22 AK308530:-22 ENST00000381365.4:56 NM_001145536:56 AK309386:92 AK128415:173 LF209173:181 MA444750:181 LF326561:328 MA562138:328 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-22 | |distance=-22 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-76 |
|end=4899480 | |end=4899480 | ||
|end_of_center_position=4899460 | |end_of_center_position=4899460 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001145536 | |nearest_refseq=NM_001145536 | ||
|nearest_unigene=Hs.579243 | |nearest_unigene=Hs.579243 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=4899439 | |start=4899439 | ||
|start_of_center_position=4899459 | |start_of_center_position=4899459 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000521575.1 | + | |transcript_name=ENST00000521575.1 AK308530 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_226525.1 | |tss_id=hg_226525.1 | ||
Revision as of 10:08, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4899459 |
|---|---|
| End of the center position in the TSS region: | 4899460 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000521575.1 AK308530 |
|---|---|
| Distance: | -22 |
| Num_trans: | 10 |
| All_trans: | ENST00000521575.1:-22 AK308530:-22 ENST00000381365.4:56 NM_001145536:56 AK309386:92 AK128415:173 LF209173:181 MA444750:181 LF326561:328 MA562138:328 |
TATA-Box annotation
| Distance to TSS: | -76 |
|---|---|
| Nearest PromoterID: | NM_001145536 |
| Entrez ID: | 100130311 |
| Nearest Unigene: | Hs.579243 |
| Nearest Refseq: | NM_001145536 |
| Nearest Ensembl: | ENSG00000205710 |
| Gene Name: | chromosome 17 open reading frame 107 |
| Gene Alias: | - |
| Gene Description: | chromosome 17 open reading frame 107 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
