Difference between revisions of "TSS:Hg 228230.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HEL-S-292= | |HEL-S-292= | ||
|WAP8= | |WAP8= | ||
| − | |all_trans=ENST00000357199.8:105 | + | |all_trans=ENST00000357199.8:105 AF492016:105 GQ472209:105 HM005608:105 AF492015:105 GQ891483:105 ENST00000289953.3:147 NM_181510:147 NM_130896:147 BC172333:184 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|dJ461P17.1= | |dJ461P17.1= | ||
|distance=105 | |distance=105 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-164 |
|end=45579465 | |end=45579465 | ||
|end_of_center_position=45579448 | |end_of_center_position=45579448 | ||
|entrez_id=90199 | |entrez_id=90199 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=C20orf170 | + | |gene_alias=C20orf170{{!}}HEL-S-292{{!}}WAP8{{!}}dJ461P17.1 |
|gene_description=WAP four-disulfide core domain 8 | |gene_description=WAP four-disulfide core domain 8 | ||
|gene_id=90199 | |gene_id=90199 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:16163 | |hgnc_mgi_id=HGNC:16163 | ||
|nearest_ensembl=ENSG00000158901 | |nearest_ensembl=ENSG00000158901 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_181510 |
|nearest_refseq=NM_130896 | |nearest_refseq=NM_130896 | ||
|nearest_unigene=Hs.116128 | |nearest_unigene=Hs.116128 | ||
| Line 30: | Line 30: | ||
|start_of_center_position=45579447 | |start_of_center_position=45579447 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000357199.8 | + | |transcript_name=ENST00000357199.8 AF492016 GQ472209 HM005608 AF492015 GQ891483 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_228230.1 | |tss_id=hg_228230.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A140VK68 |
}} | }} | ||
Revision as of 10:48, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45579447 |
|---|---|
| End of the center position in the TSS region: | 45579448 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000357199.8 AF492016 GQ472209 HM005608 AF492015 GQ891483 |
|---|---|
| Distance: | 105 |
| Num_trans: | 10 |
| All_trans: | ENST00000357199.8:105 AF492016:105 GQ472209:105 HM005608:105 AF492015:105 GQ891483:105 ENST00000289953.3:147 NM_181510:147 NM_130896:147 BC172333:184 |
TATA-Box annotation
| Distance to TSS: | -164 |
|---|---|
| Nearest PromoterID: | NM_181510 |
| Entrez ID: | 90199 |
| Nearest Unigene: | Hs.116128 |
| Nearest Refseq: | NM_130896 |
| Nearest Ensembl: | ENSG00000158901 |
| Gene Name: | WAP four-disulfide core domain 8 |
| Gene Alias: | C20orf170|HEL-S-292|WAP8|dJ461P17.1 |
| Gene Description: | WAP four-disulfide core domain 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
