Difference between revisions of "TSS:Hg 228525.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MGCR1= | |MGCR1= | ||
|MGCR1-PEN= | |MGCR1-PEN= | ||
| − | |all_trans=ENST00000302326. | + | |all_trans=X82209:76 ENST00000302326.5:-175 NM_002430:-175 |
|chr=chr22 | |chr=chr22 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|dJ353E16.2= | |dJ353E16.2= | ||
|distance=76 | |distance=76 | ||
| − | |distance_to_tss= | + | |distance_to_tss=179 |
|end=27801581 | |end=27801581 | ||
|end_of_center_position=27801578 | |end_of_center_position=27801578 | ||
|entrez_id=4330 | |entrez_id=4330 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=MGCR | + | |gene_alias=MGCR{{!}}MGCR1{{!}}MGCR1-PEN{{!}}dJ353E16.2 |
| − | |gene_description= | + | |gene_description=MN1 proto-oncogene, transcriptional regulator |
|gene_id=4330 | |gene_id=4330 | ||
| − | |gene_name= | + | |gene_name=MN1 proto-oncogene, transcriptional regulator |
|gene_source=HGNC:7180 | |gene_source=HGNC:7180 | ||
|gene_symbol=MN1 | |gene_symbol=MN1 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_002430 | |nearest_refseq=NM_002430 | ||
|nearest_unigene=Hs.268515 | |nearest_unigene=Hs.268515 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=27801573 | |start=27801573 | ||
|start_of_center_position=27801577 | |start_of_center_position=27801577 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=X82209 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_228525.1 | |tss_id=hg_228525.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 10:54, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27801577 |
|---|---|
| End of the center position in the TSS region: | 27801578 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X82209 |
|---|---|
| Distance: | 76 |
| Num_trans: | 3 |
| All_trans: | X82209:76 ENST00000302326.5:-175 NM_002430:-175 |
TATA-Box annotation
| Distance to TSS: | 179 |
|---|---|
| Nearest PromoterID: | NM_002430 |
| Entrez ID: | 4330 |
| Nearest Unigene: | Hs.268515 |
| Nearest Refseq: | NM_002430 |
| Nearest Ensembl: | ENSG00000169184 |
| Gene Name: | MN1 proto-oncogene, transcriptional regulator |
| Gene Alias: | MGCR|MGCR1|MGCR1-PEN|dJ353E16.2 |
| Gene Description: | MN1 proto-oncogene, transcriptional regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
