Difference between revisions of "TSS:Hg 231077.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PCP2= | |PCP2= | ||
|TLD= | |TLD= | ||
| − | |all_trans= | + | |all_trans=LF210146:180 MA445723:180 LF212583:340 MA448160:340 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=180 |
| − | |distance_to_tss=- | + | |distance_to_tss=-1005 |
|end=22164370 | |end=22164370 | ||
|end_of_center_position=22164367 | |end_of_center_position=22164367 | ||
|entrez_id=649 | |entrez_id=649 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=OI13 | + | |gene_alias=OI13{{!}}PCOLC{{!}}PCP{{!}}PCP2{{!}}TLD |
|gene_description=bone morphogenetic protein 1 | |gene_description=bone morphogenetic protein 1 | ||
|gene_id=649 | |gene_id=649 | ||
| − | |gene_name= | + | |gene_name=BMP1 |
|gene_source=HGNC:1067 | |gene_source=HGNC:1067 | ||
|gene_symbol=BMP1 | |gene_symbol=BMP1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_001199 | |nearest_refseq=NM_001199 | ||
|nearest_unigene=Hs.1274 | |nearest_unigene=Hs.1274 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=22164363 | |start=22164363 | ||
|start_of_center_position=22164366 | |start_of_center_position=22164366 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF210146 MA445723 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_231077.1 | |tss_id=hg_231077.1 | ||
Latest revision as of 11:52, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22164366 |
|---|---|
| End of the center position in the TSS region: | 22164367 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF210146 MA445723 |
|---|---|
| Distance: | 180 |
| Num_trans: | 4 |
| All_trans: | LF210146:180 MA445723:180 LF212583:340 MA448160:340 |
TATA-Box annotation
| Distance to TSS: | -1005 |
|---|---|
| Nearest PromoterID: | NM_006129 |
| Entrez ID: | 649 |
| Nearest Unigene: | Hs.1274 |
| Nearest Refseq: | NM_001199 |
| Nearest Ensembl: | ENSG00000168487 |
| Gene Name: | BMP1 |
| Gene Alias: | OI13|PCOLC|PCP|PCP2|TLD |
| Gene Description: | bone morphogenetic protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
