Difference between revisions of "TSS:Hg 231446.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LYB2= | |LYB2= | ||
| − | |all_trans=ENST00000259633.8 | + | |all_trans=ENST00000259633.9:8 ENST00000490239.5:8 NM_001782:8 AF283777:8 M54992:10 AK310685:21 AK310093:27 ENST00000378430.3:32 AK307305:32 ENST00000482121.1:45 AK309268:48 ENST00000378431.5:51 BC030227:53 ENST00000477364.5:66 ENST00000463720.5:68 BC011734:72 KJ890871:117 CU688854:117 AB209587:-328 ENST00000612238.4:-383 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=8 |
| − | |distance_to_tss= | + | |distance_to_tss=-11 |
|end=35618428 | |end=35618428 | ||
|end_of_center_position=35618425 | |end_of_center_position=35618425 | ||
|entrez_id=971 | |entrez_id=971 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=CD72b | + | |gene_alias=CD72b{{!}}LYB2 |
|gene_description=CD72 molecule | |gene_description=CD72 molecule | ||
|gene_id=971 | |gene_id=971 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001782 | |nearest_refseq=NM_001782 | ||
|nearest_unigene=Hs.116481 | |nearest_unigene=Hs.116481 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=35618420 | |start=35618420 | ||
|start_of_center_position=35618424 | |start_of_center_position=35618424 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000259633. | + | |transcript_name=ENST00000259633.9 ENST00000490239.5 NM_001782 AF283777 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_231446.1 | |tss_id=hg_231446.1 | ||
Revision as of 12:01, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35618424 |
|---|---|
| End of the center position in the TSS region: | 35618425 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000259633.9 ENST00000490239.5 NM_001782 AF283777 |
|---|---|
| Distance: | 8 |
| Num_trans: | 20 |
| All_trans: | ENST00000259633.9:8 ENST00000490239.5:8 NM_001782:8 AF283777:8 M54992:10 AK310685:21 AK310093:27 ENST00000378430.3:32 AK307305:32 ENST00000482121.1:45 AK309268:48 ENST00000378431.5:51 BC030227:53 ENST00000477364.5:66 ENST00000463720.5:68 BC011734:72 KJ890871:117 CU688854:117 AB209587:-328 ENST00000612238.4:-383 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_001782 |
| Entrez ID: | 971 |
| Nearest Unigene: | Hs.116481 |
| Nearest Refseq: | NM_001782 |
| Nearest Ensembl: | ENSG00000137101 |
| Gene Name: | CD72 molecule |
| Gene Alias: | CD72b|LYB2 |
| Gene Description: | CD72 molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
