Difference between revisions of "TSS:Hg 231599.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000450617. | + | |all_trans=ENST00000450617.6:36 ENST00000421699.7:42 ENST00000611957.4:42 BC069268:42 ENST00000490628.2:44 NM_004486:79 NM_001366244:79 NM_001366246:79 AF248953:91 CU686726:91 ENST00000610329.4:93 BX647920:93 KJ901459:94 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=36 | |distance=36 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-81 |
|end=128276035 | |end=128276035 | ||
|end_of_center_position=128276033 | |end_of_center_position=128276033 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4425 | |hgnc_mgi_id=HGNC:4425 | ||
|nearest_ensembl=ENSG00000167110 | |nearest_ensembl=ENSG00000167110 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366244 |
|nearest_refseq=NM_004486 | |nearest_refseq=NM_004486 | ||
|nearest_unigene=Hs.155827 | |nearest_unigene=Hs.155827 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=128276030 | |start=128276030 | ||
|start_of_center_position=128276032 | |start_of_center_position=128276032 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000450617. | + | |transcript_name=ENST00000450617.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_231599.1 | |tss_id=hg_231599.1 | ||
Revision as of 12:04, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 128276032 |
|---|---|
| End of the center position in the TSS region: | 128276033 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000450617.6 |
|---|---|
| Distance: | 36 |
| Num_trans: | 13 |
| All_trans: | ENST00000450617.6:36 ENST00000421699.7:42 ENST00000611957.4:42 BC069268:42 ENST00000490628.2:44 NM_004486:79 NM_001366244:79 NM_001366246:79 AF248953:91 CU686726:91 ENST00000610329.4:93 BX647920:93 KJ901459:94 |
TATA-Box annotation
| Distance to TSS: | -81 |
|---|---|
| Nearest PromoterID: | NM_001366244 |
| Entrez ID: | 2801 |
| Nearest Unigene: | Hs.155827 |
| Nearest Refseq: | NM_004486 |
| Nearest Ensembl: | ENSG00000167110 |
| Gene Name: | golgin A2 |
| Gene Alias: | GM130 |
| Gene Description: | golgin A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
