Difference between revisions of "TSS:Hg 232132.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-57 |
|eIF3-p170= | |eIF3-p170= | ||
|eIF3-theta= | |eIF3-theta= | ||
| Line 14: | Line 14: | ||
|entrez_id=8661 | |entrez_id=8661 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=EIF3 | + | |gene_alias=EIF3{{!}}EIF3S10{{!}}P167{{!}}TIF32{{!}}eIF3-p170{{!}}eIF3-theta{{!}}p180{{!}}p185 |
|gene_description=eukaryotic translation initiation factor 3 subunit A | |gene_description=eukaryotic translation initiation factor 3 subunit A | ||
|gene_id=8661 | |gene_id=8661 | ||
| − | |gene_name= | + | |gene_name=EIF3A |
|gene_source=HGNC:3271 | |gene_source=HGNC:3271 | ||
|gene_symbol=EIF3A | |gene_symbol=EIF3A | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_003750 | |nearest_refseq=NM_003750 | ||
|nearest_unigene=Hs.523299 | |nearest_unigene=Hs.523299 | ||
| − | |num_trans= | + | |num_trans=0 |
|p180= | |p180= | ||
|p185= | |p185= | ||
| Line 34: | Line 34: | ||
|start_of_center_position=119178780 | |start_of_center_position=119178780 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232132.1 | |tss_id=hg_232132.1 | ||
Revision as of 12:17, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119178780 |
|---|---|
| End of the center position in the TSS region: | 119178781 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000541549.2:42 uc057whi.1:42 JX312508:42 NM_003750:43 AK309542:50 BC107776:55 BC064926:59 ENST00000369144.7:61 uc001ldu.4:61 D50929:61 AK307610:65 U78311:76 BC033769:81 BC054342:84 U58046:91 BC114429:135 AB383762:189 AK302575:346 |
TATA-Box annotation
| Distance to TSS: | -57 |
|---|---|
| Nearest PromoterID: | NM_003750 |
| Entrez ID: | 8661 |
| Nearest Unigene: | Hs.523299 |
| Nearest Refseq: | NM_003750 |
| Nearest Ensembl: | ENSG00000107581 |
| Gene Name: | EIF3A |
| Gene Alias: | EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 |
| Gene Description: | eukaryotic translation initiation factor 3 subunit A |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
