Difference between revisions of "TSS:Hg 232133.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P167= | |P167= | ||
|TIF32= | |TIF32= | ||
| − | |all_trans= | + | |all_trans=BC018116:0 ENST00000392870.3:-15 NM_005308:-15 BC064506:92 L15388:98 AK309761:104 AK313012:245 AB590773:325 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-68 |
|eIF3-p170= | |eIF3-p170= | ||
|eIF3-theta= | |eIF3-theta= | ||
| Line 14: | Line 14: | ||
|entrez_id=8661 | |entrez_id=8661 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=EIF3 | + | |gene_alias=EIF3{{!}}EIF3S10{{!}}P167{{!}}TIF32{{!}}eIF3-p170{{!}}eIF3-theta{{!}}p180{{!}}p185 |
|gene_description=eukaryotic translation initiation factor 3 subunit A | |gene_description=eukaryotic translation initiation factor 3 subunit A | ||
| − | |gene_id= | + | |gene_id=2869 |
| − | |gene_name= | + | |gene_name=G protein-coupled receptor kinase 5 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:4544 |
| − | |gene_symbol= | + | |gene_symbol=GRK5 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:4544 |
|nearest_ensembl=ENSG00000107581 | |nearest_ensembl=ENSG00000107581 | ||
|nearest_promoter_id=NM_003750 | |nearest_promoter_id=NM_003750 | ||
|nearest_refseq=NM_003750 | |nearest_refseq=NM_003750 | ||
|nearest_unigene=Hs.523299 | |nearest_unigene=Hs.523299 | ||
| − | |num_trans= | + | |num_trans=8 |
|p180= | |p180= | ||
|p185= | |p185= | ||
| Line 34: | Line 34: | ||
|start_of_center_position=119207589 | |start_of_center_position=119207589 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC018116 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232133.1 | |tss_id=hg_232133.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:17, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119207589 |
|---|---|
| End of the center position in the TSS region: | 119207590 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC018116 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | BC018116:0 ENST00000392870.3:-15 NM_005308:-15 BC064506:92 L15388:98 AK309761:104 AK313012:245 AB590773:325 |
TATA-Box annotation
| Distance to TSS: | -68 |
|---|---|
| Nearest PromoterID: | NM_003750 |
| Entrez ID: | 8661 |
| Nearest Unigene: | Hs.523299 |
| Nearest Refseq: | NM_003750 |
| Nearest Ensembl: | ENSG00000107581 |
| Gene Name: | G protein-coupled receptor kinase 5 |
| Gene Alias: | EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 |
| Gene Description: | eukaryotic translation initiation factor 3 subunit A |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
