Difference between revisions of "TSS:Hg 232135.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AF493934:-51 CR457008:-51 AF368902:-76 ENST00000369101.7:-104 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=-51 |
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=119207593 | |end=119207593 | ||
|end_of_center_position=119527373 | |end_of_center_position=119527373 | ||
|entrez_id=2869 | |entrez_id=2869 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=GPRK5 | + | |gene_alias=FP2025{{!}}GPRK5 |
|gene_description=G protein-coupled receptor kinase 5 | |gene_description=G protein-coupled receptor kinase 5 | ||
| − | |gene_id= | + | |gene_id=6001 |
| − | |gene_name=G protein | + | |gene_name=regulator of G protein signaling 10 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:9992 |
| − | |gene_symbol= | + | |gene_symbol=RGS10 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:9992 |
|nearest_ensembl=ENSG00000198873 | |nearest_ensembl=ENSG00000198873 | ||
|nearest_promoter_id=NM_005308 | |nearest_promoter_id=NM_005308 | ||
|nearest_refseq=NM_005308 | |nearest_refseq=NM_005308 | ||
|nearest_unigene=Hs.524625 | |nearest_unigene=Hs.524625 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=119207585 | |start=119207585 | ||
|start_of_center_position=119527372 | |start_of_center_position=119527372 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-7(AGGCATTAAAGC,-,0.00) |
| − | |transcript_name= | + | |transcript_name=AF493934 CR457008 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232135.1 | |tss_id=hg_232135.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:17, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119527372 |
|---|---|
| End of the center position in the TSS region: | 119527373 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF493934 CR457008 |
|---|---|
| Distance: | -51 |
| Num_trans: | 4 |
| All_trans: | AF493934:-51 CR457008:-51 AF368902:-76 ENST00000369101.7:-104 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_005308 |
| Entrez ID: | 2869 |
| Nearest Unigene: | Hs.524625 |
| Nearest Refseq: | NM_005308 |
| Nearest Ensembl: | ENSG00000198873 |
| Gene Name: | regulator of G protein signaling 10 |
| Gene Alias: | FP2025|GPRK5 |
| Gene Description: | G protein-coupled receptor kinase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(AGGCATTAAAGC,-,0.00) |
