Difference between revisions of "TSS:Hg 232137.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NR_134516:27 NM_001318169:27 NM_001318168:27 NM_001318167:27 NM_001318166:27 BC101267:144 BC101269:144 BC122535:144 BC101268:144 BC132787:204 ENST00000398250.6:300 NM_001030059:300 AK296273:320 HQ258170:374 KJ895775:374 KJ903972:374 AK310178:376 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=27 |
|distance_to_tss=9160 | |distance_to_tss=9160 | ||
|end=119527373 | |end=119527373 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=regulator of G | + | |gene_description=regulator of G protein signaling 10 |
| − | |gene_id= | + | |gene_id=196051 |
| − | |gene_name= | + | |gene_name=phospholipid phosphatase 4 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:23531 |
| − | |gene_symbol= | + | |gene_symbol=PLPP4 |
| − | |gene_synonyms= | + | |gene_synonyms=DPPL2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:23531 |
|nearest_ensembl=ENSG00000148908 | |nearest_ensembl=ENSG00000148908 | ||
|nearest_promoter_id=NM_002925 | |nearest_promoter_id=NM_002925 | ||
|nearest_refseq=NM_002925 | |nearest_refseq=NM_002925 | ||
|nearest_unigene=Hs.501200 | |nearest_unigene=Hs.501200 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=119527372 | |start=119527372 | ||
|start_of_center_position=120456926 | |start_of_center_position=120456926 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_134516 NM_001318169 NM_001318168 NM_001318167 NM_001318166 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232137.1 | |tss_id=hg_232137.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5VZY2 |
}} | }} | ||
Revision as of 12:17, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120456926 |
|---|---|
| End of the center position in the TSS region: | 120456927 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_134516 NM_001318169 NM_001318168 NM_001318167 NM_001318166 |
|---|---|
| Distance: | 27 |
| Num_trans: | 17 |
| All_trans: | NR_134516:27 NM_001318169:27 NM_001318168:27 NM_001318167:27 NM_001318166:27 BC101267:144 BC101269:144 BC122535:144 BC101268:144 BC132787:204 ENST00000398250.6:300 NM_001030059:300 AK296273:320 HQ258170:374 KJ895775:374 KJ903972:374 AK310178:376 |
TATA-Box annotation
| Distance to TSS: | 9160 |
|---|---|
| Nearest PromoterID: | NM_002925 |
| Entrez ID: | 6001 |
| Nearest Unigene: | Hs.501200 |
| Nearest Refseq: | NM_002925 |
| Nearest Ensembl: | ENSG00000148908 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | - |
| Gene Description: | regulator of G protein signaling 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
