Difference between revisions of "TSS:Hg 232193.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000451677.1:-11 ENST00000378201.6:-33 AK223418:-45 ENST00000378203.5:-68 ENST00000616640.1:-68 NM_001265601:-68 ENST00000378202.5:83 ENST00000378197.5:107 NM_183005:107 NM_001097590:107 NM_006414:107 AK057006:134 U77664:137 BC029494:151 ENST00000441850.1:172 AF079567:376 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 11: | Line 11: | ||
|gene_alias=C10orf30 | |gene_alias=C10orf30 | ||
|gene_description=BEN domain containing 7 | |gene_description=BEN domain containing 7 | ||
| − | |gene_id= | + | |gene_id=10557 |
| − | |gene_name= | + | |gene_name=ribonuclease P/MRP subunit p38 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:30329 |
| − | |gene_symbol= | + | |gene_symbol=RPP38 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:30329 |
|nearest_ensembl=ENSG00000165626 | |nearest_ensembl=ENSG00000165626 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152751 |
|nearest_refseq=NM_152751 | |nearest_refseq=NM_152751 | ||
|nearest_unigene=Hs.498740 | |nearest_unigene=Hs.498740 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=13502933 | |start=13502933 | ||
|start_of_center_position=15097247 | |start_of_center_position=15097247 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000451677.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232193.1 | |tss_id=hg_232193.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:18, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 15097247 |
|---|---|
| End of the center position in the TSS region: | 15097248 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000451677.1 |
|---|---|
| Distance: | -11 |
| Num_trans: | 16 |
| All_trans: | ENST00000451677.1:-11 ENST00000378201.6:-33 AK223418:-45 ENST00000378203.5:-68 ENST00000616640.1:-68 NM_001265601:-68 ENST00000378202.5:83 ENST00000378197.5:107 NM_183005:107 NM_001097590:107 NM_006414:107 AK057006:134 U77664:137 BC029494:151 ENST00000441850.1:172 AF079567:376 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_152751 |
| Entrez ID: | 222389 |
| Nearest Unigene: | Hs.498740 |
| Nearest Refseq: | NM_152751 |
| Nearest Ensembl: | ENSG00000165626 |
| Gene Name: | ribonuclease P/MRP subunit p38 |
| Gene Alias: | C10orf30 |
| Gene Description: | BEN domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
