Difference between revisions of "TSS:Hg 232212.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=594 |
|end=21534766 | |end=21534766 | ||
|end_of_center_position=23179451 | |end_of_center_position=23179451 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195627 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=21534765 | |start=21534765 | ||
|start_of_center_position=23179450 | |start_of_center_position=23179450 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232212.1 | |tss_id=hg_232212.1 | ||
Revision as of 12:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23179450 |
|---|---|
| End of the center position in the TSS region: | 23179451 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000430455.1:-17 ENST00000462999.5:-17 ENST00000480415.5:-17 ENST00000479634.1:-17 uc057sdz.1:-17 uc009xkf.2:-17 uc009xke.2:-17 uc001iqx.2:-17 AF060927:-17 AF060934:-17 AF060935:-17 AF060936:-17 AF060937:-17 AF060938:-17 ENST00000476557.5:-64 uc057sdy.1:-64 ENST00000621220.4:-121 ENST00000377059.7:-121 NM_001195626:-121 uc057sdx.1:-121 uc021pny.2:-121 CU687346:-121 BC156206:-121 BC156949:-121 AY598745:-121 KJ892460:-121 ENST00000495130.5:-276 uc057sdw.1:-276 BC129946:-287 BC094844:-289 BC052798:-292 ENST00000471315.5:-298 uc057sdv.1:-298 AB209755:-300 ENST00000377091.6:-421 uc001iqr.3:-421 ENST00000307729.11:-423 uc001iqt.4:-423 BC065376:-423 BC080577:-423 U13948:-428 |
TATA-Box annotation
| Distance to TSS: | 594 |
|---|---|
| Nearest PromoterID: | NM_001195627 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
