Difference between revisions of "TSS:Hg 232260.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AB587328:-52 BC111845:-52 NM_031866:-56 AB043703:-56 LG052822:126 FR772937:175 LF137933:175 LF161609:175 LF162898:175 LF953650:175 LG005995:175 LG053691:175 LG240930:175 LQ072065:175 LV471015:175 MA405820:175 MA645566:175 MA733450:175 MA802619:175 MP129705:175 MP162628:175 DQ577917:232 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=-52 |
| − | |distance_to_tss= | + | |distance_to_tss=68180 |
|end=35006105 | |end=35006105 | ||
|end_of_center_position=35641378 | |end_of_center_position=35641378 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=cullin 2 | |gene_description=cullin 2 | ||
| − | |gene_name= | + | |gene_id=8325 |
| + | |gene_name=frizzled class receptor 8 | ||
| + | |gene_source=HGNC:4046 | ||
| + | |gene_symbol=FZD8 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4046 | ||
|nearest_ensembl=ENSG00000108094 | |nearest_ensembl=ENSG00000108094 | ||
|nearest_promoter_id=NM_001324376 | |nearest_promoter_id=NM_001324376 | ||
|nearest_refseq=NM_003591 | |nearest_refseq=NM_003591 | ||
|nearest_unigene=Hs.82919 | |nearest_unigene=Hs.82919 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=35006101 | |start=35006101 | ||
|start_of_center_position=35641377 | |start_of_center_position=35641377 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB587328 BC111845 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232260.1 | |tss_id=hg_232260.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:20, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35641377 |
|---|---|
| End of the center position in the TSS region: | 35641378 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB587328 BC111845 |
|---|---|
| Distance: | -52 |
| Num_trans: | 22 |
| All_trans: | AB587328:-52 BC111845:-52 NM_031866:-56 AB043703:-56 LG052822:126 FR772937:175 LF137933:175 LF161609:175 LF162898:175 LF953650:175 LG005995:175 LG053691:175 LG240930:175 LQ072065:175 LV471015:175 MA405820:175 MA645566:175 MA733450:175 MA802619:175 MP129705:175 MP162628:175 DQ577917:232 |
TATA-Box annotation
| Distance to TSS: | 68180 |
|---|---|
| Nearest PromoterID: | NM_001324376 |
| Entrez ID: | 8453 |
| Nearest Unigene: | Hs.82919 |
| Nearest Refseq: | NM_003591 |
| Nearest Ensembl: | ENSG00000108094 |
| Gene Name: | frizzled class receptor 8 |
| Gene Alias: | - |
| Gene Description: | cullin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
