Difference between revisions of "TSS:Hg 232328.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Fbx18= | |Fbx18= | ||
| − | |all_trans= | + | |all_trans=ENST00000373820.5:20 AK092361:20 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=20 |
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=5894370 | |end=5894370 | ||
| Line 10: | Line 10: | ||
|entrez_id=84893 | |entrez_id=84893 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias= | + | |gene_alias=FBXO18{{!}}Fbx18{{!}}hFBH1 |
| − | |gene_description= | + | |gene_description=F-box DNA helicase 1 |
| − | |gene_id= | + | |gene_id=288 |
| − | |gene_name= | + | |gene_name=ankyrin 3 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:494 |
| − | |gene_symbol= | + | |gene_symbol=ANK3 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hFBH1= | |hFBH1= | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:494 |
|nearest_ensembl=ENSG00000134452 | |nearest_ensembl=ENSG00000134452 | ||
|nearest_promoter_id=NM_032807 | |nearest_promoter_id=NM_032807 | ||
|nearest_refseq=NM_032807 | |nearest_refseq=NM_032807 | ||
|nearest_unigene=Hs.498543 | |nearest_unigene=Hs.498543 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=5894369 | |start=5894369 | ||
|start_of_center_position=60082705 | |start_of_center_position=60082705 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000373820.5 AK092361 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232328.1 | |tss_id=hg_232328.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B1AQT0 H0Y3A4 |
}} | }} | ||
Revision as of 12:21, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60082705 |
|---|---|
| End of the center position in the TSS region: | 60082706 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373820.5 AK092361 |
|---|---|
| Distance: | 20 |
| Num_trans: | 2 |
| All_trans: | ENST00000373820.5:20 AK092361:20 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_032807 |
| Entrez ID: | 84893 |
| Nearest Unigene: | Hs.498543 |
| Nearest Refseq: | NM_032807 |
| Nearest Ensembl: | ENSG00000134452 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | FBXO18|Fbx18|hFBH1 |
| Gene Description: | F-box DNA helicase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
