Difference between revisions of "TSS:Hg 232350.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=CU677334:9 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=9 |
|distance_to_tss=687 | |distance_to_tss=687 | ||
|end=68828224 | |end=68828224 | ||
| Line 12: | Line 12: | ||
|gene_description=storkhead box 1 | |gene_description=storkhead box 1 | ||
|gene_id=219736 | |gene_id=219736 | ||
| − | |gene_name= | + | |gene_name=STOX1 |
|gene_source=HGNC:23508 | |gene_source=HGNC:23508 | ||
|gene_symbol=STOX1 | |gene_symbol=STOX1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23508 | |hgnc_mgi_id=HGNC:23508 | ||
|nearest_ensembl=ENSG00000165730 | |nearest_ensembl=ENSG00000165730 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001130160 |
|nearest_refseq=NM_152709 | |nearest_refseq=NM_152709 | ||
|nearest_unigene=Hs.37636 | |nearest_unigene=Hs.37636 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=69104136 | |start_of_center_position=69104136 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=CU677334 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232350.1 | |tss_id=hg_232350.1 | ||
Revision as of 12:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69104136 |
|---|---|
| End of the center position in the TSS region: | 69104137 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU677334 |
|---|---|
| Distance: | 9 |
| Num_trans: | 1 |
| All_trans: | CU677334:9 |
TATA-Box annotation
| Distance to TSS: | 687 |
|---|---|
| Nearest PromoterID: | NM_001130160 |
| Entrez ID: | 219736 |
| Nearest Unigene: | Hs.37636 |
| Nearest Refseq: | NM_152709 |
| Nearest Ensembl: | ENSG00000165730 |
| Gene Name: | STOX1 |
| Gene Alias: | C10orf24 |
| Gene Description: | storkhead box 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
