Difference between revisions of "TSS:Hg 232353.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=119 |
|end=68956289 | |end=68956289 | ||
|end_of_center_position=70202960 | |end_of_center_position=70202960 | ||
|entrez_id=9188 | |entrez_id=9188 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=GUA | + | |gene_alias=GUA{{!}}GURDB{{!}}RH-II/GU{{!}}RH-II/GuA |
|gene_description=DExD-box helicase 21 | |gene_description=DExD-box helicase 21 | ||
|gene_id=9188 | |gene_id=9188 | ||
| − | |gene_name= | + | |gene_name=DDX21 |
|gene_source=HGNC:2744 | |gene_source=HGNC:2744 | ||
|gene_symbol=DDX21 | |gene_symbol=DDX21 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:2744 | |hgnc_mgi_id=HGNC:2744 | ||
|nearest_ensembl=ENSG00000165732 | |nearest_ensembl=ENSG00000165732 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004728 |
|nearest_refseq=NM_004728 | |nearest_refseq=NM_004728 | ||
|nearest_unigene=Hs.223141 | |nearest_unigene=Hs.223141 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=68956288 | |start=68956288 | ||
|start_of_center_position=70202959 | |start_of_center_position=70202959 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232353.1 | |tss_id=hg_232353.1 | ||
Revision as of 12:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70202959 |
|---|---|
| End of the center position in the TSS region: | 70202960 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | CU675917:-63 AB527408:-63 KJ892707:-63 BC004182:-96 BC017228:-96 BC008071:-104 AK315585:-116 U41387:-117 BC009432:-119 ENST00000620315.1:151 NM_001256910:151 uc001jow.3:151 CR749598:151 ENST00000354185.8:-161 uc001jov.3:-161 BC104671:-161 NM_004728:-166 BX648405:383 |
TATA-Box annotation
| Distance to TSS: | 119 |
|---|---|
| Nearest PromoterID: | NM_004728 |
| Entrez ID: | 9188 |
| Nearest Unigene: | Hs.223141 |
| Nearest Refseq: | NM_004728 |
| Nearest Ensembl: | ENSG00000165732 |
| Gene Name: | DDX21 |
| Gene Alias: | GUA|GURDB|RH-II/GU|RH-II/GuA |
| Gene Description: | DExD-box helicase 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
