Difference between revisions of "TSS:Hg 232389.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000372499.5:-52 NM_032024:-52 AF267860:-52 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=-52 |
| − | |distance_to_tss= | + | |distance_to_tss=23 |
|end=74151248 | |end=74151248 | ||
|end_of_center_position=75782813 | |end_of_center_position=75782813 | ||
| Line 11: | Line 11: | ||
|gene_alias=AK | |gene_alias=AK | ||
|gene_description=adenosine kinase | |gene_description=adenosine kinase | ||
| − | |gene_id= | + | |gene_id=83938 |
| − | |gene_name= | + | |gene_name=leucine rich melanocyte differentiation associated |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:23405 |
| − | |gene_symbol= | + | |gene_symbol=LRMDA |
| − | |gene_synonyms= | + | |gene_synonyms=CDA017 OCA7 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:23405 |
|nearest_ensembl=ENSG00000156110 | |nearest_ensembl=ENSG00000156110 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369123 |
|nearest_refseq=NM_001123 | |nearest_refseq=NM_001123 | ||
|nearest_unigene=Hs.656586 | |nearest_unigene=Hs.656586 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=74151239 | |start=74151239 | ||
|start_of_center_position=75782812 | |start_of_center_position=75782812 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000372499.5 NM_032024 AF267860 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232389.1 | |tss_id=hg_232389.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9H2I8 |
}} | }} | ||
Revision as of 12:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75782812 |
|---|---|
| End of the center position in the TSS region: | 75782813 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372499.5 NM_032024 AF267860 |
|---|---|
| Distance: | -52 |
| Num_trans: | 3 |
| All_trans: | ENST00000372499.5:-52 NM_032024:-52 AF267860:-52 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_001369123 |
| Entrez ID: | 132 |
| Nearest Unigene: | Hs.656586 |
| Nearest Refseq: | NM_001123 |
| Nearest Ensembl: | ENSG00000156110 |
| Gene Name: | leucine rich melanocyte differentiation associated |
| Gene Alias: | AK |
| Gene Description: | adenosine kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
