Difference between revisions of "TSS:Hg 232443.1"
From referenceTSS
| Line 10: | Line 10: | ||
|PDLIM6= | |PDLIM6= | ||
|ZASP= | |ZASP= | ||
| + | |all_trans=ENST00000371939.7:0 NM_001010939:0 BC031219:0 ENST00000526923.1:-9 BC042900:-9 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=11542 |
|end=86680111 | |end=86680111 | ||
|end_of_center_position=88586762 | |end_of_center_position=88586762 | ||
|entrez_id=11155 | |entrez_id=11155 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=CMD1C | + | |gene_alias=CMD1C{{!}}CMH24{{!}}CMPD3{{!}}CYPHER{{!}}LDB3Z1{{!}}LDB3Z4{{!}}LVNC3{{!}}MFM4{{!}}ORACLE{{!}}PDLIM6{{!}}ZASP |
|gene_description=LIM domain binding 3 | |gene_description=LIM domain binding 3 | ||
| − | |gene_name= | + | |gene_id=142910 |
| + | |gene_name=lipase family member J | ||
| + | |gene_source=HGNC:21773 | ||
| + | |gene_symbol=LIPJ | ||
| + | |gene_synonyms=bA425M17.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21773 | ||
|nearest_ensembl=ENSG00000122367 | |nearest_ensembl=ENSG00000122367 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001080116 |
|nearest_refseq=NM_007078 | |nearest_refseq=NM_007078 | ||
|nearest_unigene=Hs.657271 | |nearest_unigene=Hs.657271 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=86680101 | |start=86680101 | ||
|start_of_center_position=88586761 | |start_of_center_position=88586761 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000371939.7 NM_001010939 BC031219 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232443.1 | |tss_id=hg_232443.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5W064 | ||
}} | }} | ||
Revision as of 12:24, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88586761 |
|---|---|
| End of the center position in the TSS region: | 88586762 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371939.7 NM_001010939 BC031219 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000371939.7:0 NM_001010939:0 BC031219:0 ENST00000526923.1:-9 BC042900:-9 |
TATA-Box annotation
| Distance to TSS: | 11542 |
|---|---|
| Nearest PromoterID: | NM_001080116 |
| Entrez ID: | 11155 |
| Nearest Unigene: | Hs.657271 |
| Nearest Refseq: | NM_007078 |
| Nearest Ensembl: | ENSG00000122367 |
| Gene Name: | lipase family member J |
| Gene Alias: | CMD1C|CMH24|CMPD3|CYPHER|LDB3Z1|LDB3Z4|LVNC3|MFM4|ORACLE|PDLIM6|ZASP |
| Gene Description: | LIM domain binding 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
