Difference between revisions of "TSS:Hg 232486.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MLR2= | |MLR2= | ||
| − | |all_trans= | + | |all_trans=BC110810:151 ENST00000370602.6:-244 NM_001010917:-244 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=151 |
| − | |distance_to_tss= | + | |distance_to_tss=120 |
|end=96833065 | |end=96833065 | ||
|end_of_center_position=97850087 | |end_of_center_position=97850087 | ||
|entrez_id=84458 | |entrez_id=84458 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=C10orf12 | + | |gene_alias=C10orf12{{!}}MLR2 |
|gene_description=ligand dependent nuclear receptor corepressor | |gene_description=ligand dependent nuclear receptor corepressor | ||
| − | |gene_id= | + | |gene_id=401647 |
| − | |gene_name= | + | |gene_name=golgin A7 family member B |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:31668 |
| − | |gene_symbol= | + | |gene_symbol=GOLGA7B |
| − | |gene_synonyms= | + | |gene_synonyms=bA451M19.3 bA459F3.4 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:31668 |
|nearest_ensembl=ENSG00000196233 | |nearest_ensembl=ENSG00000196233 | ||
|nearest_promoter_id=NM_032440 | |nearest_promoter_id=NM_032440 | ||
|nearest_refseq=NM_015652 | |nearest_refseq=NM_015652 | ||
|nearest_unigene=Hs.427927 | |nearest_unigene=Hs.427927 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=96833064 | |start=96833064 | ||
|start_of_center_position=97850086 | |start_of_center_position=97850086 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC110810 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232486.1 | |tss_id=hg_232486.1 | ||
Revision as of 12:25, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 97850086 |
|---|---|
| End of the center position in the TSS region: | 97850087 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC110810 |
|---|---|
| Distance: | 151 |
| Num_trans: | 3 |
| All_trans: | BC110810:151 ENST00000370602.6:-244 NM_001010917:-244 |
TATA-Box annotation
| Distance to TSS: | 120 |
|---|---|
| Nearest PromoterID: | NM_032440 |
| Entrez ID: | 84458 |
| Nearest Unigene: | Hs.427927 |
| Nearest Refseq: | NM_015652 |
| Nearest Ensembl: | ENSG00000196233 |
| Gene Name: | golgin A7 family member B |
| Gene Alias: | C10orf12|MLR2 |
| Gene Description: | ligand dependent nuclear receptor corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
