Difference between revisions of "TSS:Hg 232995.1"
From referenceTSS
| Line 4: | Line 4: | ||
|KSGal6ST= | |KSGal6ST= | ||
|KSST= | |KSST= | ||
| + | |all_trans=ENST00000314845.7:-52 NM_017749:-52 NM_001367468:-52 BC045609:-52 LF383707:-52 MA619284:-52 ENST00000458649.6:-111 AK302808:-111 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-52 |
| − | |distance_to_tss= | + | |distance_to_tss=16599 |
|end=45649031 | |end=45649031 | ||
|end_of_center_position=46591312 | |end_of_center_position=46591312 | ||
|entrez_id=8534 | |entrez_id=8534 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=C6ST | + | |gene_alias=C6ST{{!}}GST-1{{!}}KS6ST{{!}}KSGal6ST{{!}}KSST |
|gene_description=carbohydrate sulfotransferase 1 | |gene_description=carbohydrate sulfotransferase 1 | ||
| − | |gene_name= | + | |gene_id=55626 |
| + | |gene_name=autophagy and beclin 1 regulator 1 | ||
| + | |gene_source=HGNC:25990 | ||
| + | |gene_symbol=AMBRA1 | ||
| + | |gene_synonyms=DCAF3 FLJ20294 KIAA1736 WDR94 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25990 | ||
|nearest_ensembl=ENSG00000175264 | |nearest_ensembl=ENSG00000175264 | ||
|nearest_promoter_id=NM_003654 | |nearest_promoter_id=NM_003654 | ||
|nearest_refseq=NM_003654 | |nearest_refseq=NM_003654 | ||
|nearest_unigene=Hs.104576 | |nearest_unigene=Hs.104576 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=45649015 | |start=45649015 | ||
|start_of_center_position=46591311 | |start_of_center_position=46591311 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000314845.7 NM_017749 NM_001367468 BC045609 LF383707 MA619284 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232995.1 | |tss_id=hg_232995.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q9C0C7 | ||
}} | }} | ||
Revision as of 12:37, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46591311 |
|---|---|
| End of the center position in the TSS region: | 46591312 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000314845.7 NM_017749 NM_001367468 BC045609 LF383707 MA619284 |
|---|---|
| Distance: | -52 |
| Num_trans: | 8 |
| All_trans: | ENST00000314845.7:-52 NM_017749:-52 NM_001367468:-52 BC045609:-52 LF383707:-52 MA619284:-52 ENST00000458649.6:-111 AK302808:-111 |
TATA-Box annotation
| Distance to TSS: | 16599 |
|---|---|
| Nearest PromoterID: | NM_003654 |
| Entrez ID: | 8534 |
| Nearest Unigene: | Hs.104576 |
| Nearest Refseq: | NM_003654 |
| Nearest Ensembl: | ENSG00000175264 |
| Gene Name: | autophagy and beclin 1 regulator 1 |
| Gene Alias: | C6ST|GST-1|KS6ST|KSGal6ST|KSST |
| Gene Description: | carbohydrate sulfotransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
