Difference between revisions of "TSS:Hg 233181.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |all_trans=ENST00000368341.8:3 ENST00000494995.5:3 AK001366:3 AK297140:3 AK056128:3 AK092950:3 ENST00000482284.5:5 ENST00000490642.5:6 CR749791:6 AK222863:6 BC002535:-11 AB587518:11 AM393003:11 EU832296:11 EU832380:11 AK309573:11 KJ894142:11 ENST00000491308.5:16 ENST00000471209.1:-17 ENST00000649846.1:-18 ENST00000245564.8:-18 ENST00000490743.5:-18 NM_018116:-18 BX537684:-18 ENST00000460199.5:-20 ENST00000483832.5:25 ENST00000488901.5:-31 CR936872:-37 AK290610:-41 NR_024117:-48 AF272833:54 NR_146908:-66 NM_001350786:-66 NM_001350777:-66 NM_001350774:-66 NM_001256532:-66 NM_001350779:-66 NM_001350781:-66 NM_001350784:-66 NM_001350776:-66 NM_001350775:-66 NM_001350773:-66 NM_001350788:-66 NM_001350778:-66 NM_001350785:-66 NM_001350789:-66 NM_001350787:-66 NM_001350783:-66 NM_001256533:-66 NM_001350772:-66 NM_001350782:-66 NR_046292:-66 NR_046294:-66 NR_046293:-66 NR_046295:-66 NR_146907:-66 NM_001350780:-66 ENST00000465137.5:74 ENST00000473327.5:146 ENST00000483734.5:382 AY334564:382 ENST00000478756.1:447 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
− | |distance= | + | |distance=3 |
− | |distance_to_tss= | + | |distance_to_tss=47 |
|end=154502365 | |end=154502365 | ||
|end_of_center_position=155610237 | |end_of_center_position=155610237 | ||
− | |entrez_id= | + | |entrez_id=126669 |
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=- | |gene_alias=- | ||
− | |gene_description= | + | |gene_description=Src homology 2 domain containing E |
− | |gene_id= | + | |gene_id=55154 |
− | |gene_name= | + | |gene_name=misato mitochondrial distribution and morphology regulator 1 |
− | |gene_source=HGNC: | + | |gene_source=HGNC:29678 |
− | |gene_symbol= | + | |gene_symbol=MSTO1 |
− | |gene_synonyms= | + | |gene_synonyms=FLJ10504 LST005 MST misato |
|gene_type=protein-coding | |gene_type=protein-coding | ||
− | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:29678 |
− | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000169291 |
− | |nearest_promoter_id= | + | |nearest_promoter_id=NR_135169 |
− | |nearest_refseq= | + | |nearest_refseq=NM_001010846 |
− | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.591481 |
− | |num_trans= | + | |num_trans=62 |
|species=human | |species=human | ||
|start=154502364 | |start=154502364 | ||
|start_of_center_position=155610236 | |start_of_center_position=155610236 | ||
|strand=+ | |strand=+ | ||
− | |transcript_name= | + | |transcript_name=ENST00000368341.8 ENST00000494995.5 AK001366 AK297140 AK056128 AK092950 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233181.1 | |tss_id=hg_233181.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id= | + | |uniprot_id=B4DLS9 Q9BUK6 |
}} | }} |
Revision as of 12:41, 17 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 155610236 |
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End of the center position in the TSS region: | 155610237 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000368341.8 ENST00000494995.5 AK001366 AK297140 AK056128 AK092950 |
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Distance: | 3 |
Num_trans: | 62 |
All_trans: | ENST00000368341.8:3 ENST00000494995.5:3 AK001366:3 AK297140:3 AK056128:3 AK092950:3 ENST00000482284.5:5 ENST00000490642.5:6 CR749791:6 AK222863:6 BC002535:-11 AB587518:11 AM393003:11 EU832296:11 EU832380:11 AK309573:11 KJ894142:11 ENST00000491308.5:16 ENST00000471209.1:-17 ENST00000649846.1:-18 ENST00000245564.8:-18 ENST00000490743.5:-18 NM_018116:-18 BX537684:-18 ENST00000460199.5:-20 ENST00000483832.5:25 ENST00000488901.5:-31 CR936872:-37 AK290610:-41 NR_024117:-48 AF272833:54 NR_146908:-66 NM_001350786:-66 NM_001350777:-66 NM_001350774:-66 NM_001256532:-66 NM_001350779:-66 NM_001350781:-66 NM_001350784:-66 NM_001350776:-66 NM_001350775:-66 NM_001350773:-66 NM_001350788:-66 NM_001350778:-66 NM_001350785:-66 NM_001350789:-66 NM_001350787:-66 NM_001350783:-66 NM_001256533:-66 NM_001350772:-66 NM_001350782:-66 NR_046292:-66 NR_046294:-66 NR_046293:-66 NR_046295:-66 NR_146907:-66 NM_001350780:-66 ENST00000465137.5:74 ENST00000473327.5:146 ENST00000483734.5:382 AY334564:382 ENST00000478756.1:447 |
TATA-Box annotation
Distance to TSS: | 47 |
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Nearest PromoterID: | NR_135169 |
Entrez ID: | 126669 |
Nearest Unigene: | Hs.591481 |
Nearest Refseq: | NM_001010846 |
Nearest Ensembl: | ENSG00000169291 |
Gene Name: | misato mitochondrial distribution and morphology regulator 1 |
Gene Alias: | - |
Gene Description: | Src homology 2 domain containing E |
Gene Type: | protein-coding |
CpG%: | 0.12 |
GC%: | 0.766169 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |