Personal tools

Difference between revisions of "TSS:Hg 233181.1"

From referenceTSS

Jump to: navigation, search
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000368482.8:-146 NM_182499:-146 NM_001098475:-146 uc001ffd.3:-146 BC044864:-146
+
|all_trans=ENST00000368341.8:3 ENST00000494995.5:3 AK001366:3 AK297140:3 AK056128:3 AK092950:3 ENST00000482284.5:5 ENST00000490642.5:6 CR749791:6 AK222863:6 BC002535:-11 AB587518:11 AM393003:11 EU832296:11 EU832380:11 AK309573:11 KJ894142:11 ENST00000491308.5:16 ENST00000471209.1:-17 ENST00000649846.1:-18 ENST00000245564.8:-18 ENST00000490743.5:-18 NM_018116:-18 BX537684:-18 ENST00000460199.5:-20 ENST00000483832.5:25 ENST00000488901.5:-31 CR936872:-37 AK290610:-41 NR_024117:-48 AF272833:54 NR_146908:-66 NM_001350786:-66 NM_001350777:-66 NM_001350774:-66 NM_001256532:-66 NM_001350779:-66 NM_001350781:-66 NM_001350784:-66 NM_001350776:-66 NM_001350775:-66 NM_001350773:-66 NM_001350788:-66 NM_001350778:-66 NM_001350785:-66 NM_001350789:-66 NM_001350787:-66 NM_001350783:-66 NM_001256533:-66 NM_001350772:-66 NM_001350782:-66 NR_046292:-66 NR_046294:-66 NR_046293:-66 NR_046295:-66 NR_146907:-66 NM_001350780:-66 ENST00000465137.5:74 ENST00000473327.5:146 ENST00000483734.5:382 AY334564:382 ENST00000478756.1:447
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.12
 
|cpg_percent=0.12
|distance=-146
+
|distance=3
|distance_to_tss=146
+
|distance_to_tss=47
 
|end=154502365
 
|end=154502365
 
|end_of_center_position=155610237
 
|end_of_center_position=155610237
|entrez_id=126668
+
|entrez_id=126669
 
|gc_percent=0.766169
 
|gc_percent=0.766169
 
|gene_alias=-
 
|gene_alias=-
|gene_description=tudor domain containing 10
+
|gene_description=Src homology 2 domain containing E
|gene_id=126668
+
|gene_id=55154
|gene_name=tudor domain containing 10
+
|gene_name=misato mitochondrial distribution and morphology regulator 1
|gene_source=HGNC:25316
+
|gene_source=HGNC:29678
|gene_symbol=TDRD10
+
|gene_symbol=MSTO1
|gene_synonyms=DKFZp434M202
+
|gene_synonyms=FLJ10504 LST005 MST misato
 
|gene_type=protein-coding
 
|gene_type=protein-coding
|hgnc_mgi_id=HGNC:25316
+
|hgnc_mgi_id=HGNC:29678
|nearest_ensembl=ENSG00000163239
+
|nearest_ensembl=ENSG00000169291
|nearest_promoter_id=NM_001098475
+
|nearest_promoter_id=NR_135169
|nearest_refseq=NM_182499
+
|nearest_refseq=NM_001010846
|nearest_unigene=Hs.387671
+
|nearest_unigene=Hs.591481
|num_trans=5
+
|num_trans=62
 
|species=human
 
|species=human
 
|start=154502364
 
|start=154502364
 
|start_of_center_position=155610236
 
|start_of_center_position=155610236
 
|strand=+
 
|strand=+
|transcript_name=ENST00000368482.8 NM_182499 NM_001098475 uc001ffd.3 BC044864
+
|transcript_name=ENST00000368341.8 ENST00000494995.5 AK001366 AK297140 AK056128 AK092950
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_233181.1
 
|tss_id=hg_233181.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=Q5VZ19
+
|uniprot_id=B4DLS9 Q9BUK6
 
}}
 
}}

Revision as of 12:41, 17 June 2021

Basic information about the TSS


TSS ID:hg_233181.1
Species:human
Chr:chr1
TSS Classification:yes
Start:154502364
End:154502365
Strand:+
TSS Score:1
Start of the center position in the TSS region:155610236
End of the center position in the TSS region:155610237



Gene and protein annotation


Transcript_name:ENST00000368341.8 ENST00000494995.5 AK001366 AK297140 AK056128 AK092950
Distance:3
GeneID:55154
HGNC/MGI_ID:HGNC:29678
UniProt_ID:B4DLS9 Q9BUK6
Gene_name:misato mitochondrial distribution and morphology regulator 1
Gene_symbol:MSTO1
Gene_synonyms:FLJ10504 LST005 MST misato
Gene_source:HGNC:29678



Transcript annotation


Transcript_name:ENST00000368341.8 ENST00000494995.5 AK001366 AK297140 AK056128 AK092950
Distance:3
Num_trans:62
All_trans:ENST00000368341.8:3 ENST00000494995.5:3 AK001366:3 AK297140:3 AK056128:3 AK092950:3 ENST00000482284.5:5 ENST00000490642.5:6 CR749791:6 AK222863:6 BC002535:-11 AB587518:11 AM393003:11 EU832296:11 EU832380:11 AK309573:11 KJ894142:11 ENST00000491308.5:16 ENST00000471209.1:-17 ENST00000649846.1:-18 ENST00000245564.8:-18 ENST00000490743.5:-18 NM_018116:-18 BX537684:-18 ENST00000460199.5:-20 ENST00000483832.5:25 ENST00000488901.5:-31 CR936872:-37 AK290610:-41 NR_024117:-48 AF272833:54 NR_146908:-66 NM_001350786:-66 NM_001350777:-66 NM_001350774:-66 NM_001256532:-66 NM_001350779:-66 NM_001350781:-66 NM_001350784:-66 NM_001350776:-66 NM_001350775:-66 NM_001350773:-66 NM_001350788:-66 NM_001350778:-66 NM_001350785:-66 NM_001350789:-66 NM_001350787:-66 NM_001350783:-66 NM_001256533:-66 NM_001350772:-66 NM_001350782:-66 NR_046292:-66 NR_046294:-66 NR_046293:-66 NR_046295:-66 NR_146907:-66 NM_001350780:-66 ENST00000465137.5:74 ENST00000473327.5:146 ENST00000483734.5:382 AY334564:382 ENST00000478756.1:447



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NR_135169
Entrez ID:126669
Nearest Unigene:Hs.591481
Nearest Refseq:NM_001010846
Nearest Ensembl:ENSG00000169291
Gene Name:misato mitochondrial distribution and morphology regulator 1
Gene Alias:-
Gene Description:Src homology 2 domain containing E
Gene Type:protein-coding
CpG%:0.12
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):