Difference between revisions of "TSS:Hg 233203.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=35 | |distance_to_tss=35 | ||
|end=155610224 | |end=155610224 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=MSTO2 | |gene_alias=MSTO2 | ||
| − | |gene_description= | + | |gene_description=misato family member 2, pseudogene |
|gene_id=55154 | |gene_id=55154 | ||
| − | |gene_name= | + | |gene_name=MSTO2P |
|gene_source=HGNC:29678 | |gene_source=HGNC:29678 | ||
|gene_symbol=MSTO1 | |gene_symbol=MSTO1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_024117 | |nearest_refseq=NR_024117 | ||
|nearest_unigene=Hs.656361 | |nearest_unigene=Hs.656361 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=155610222 | |start=155610222 | ||
|start_of_center_position=156620077 | |start_of_center_position=156620077 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233203.1 | |tss_id=hg_233203.1 | ||
Revision as of 12:42, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 156620077 |
|---|---|
| End of the center position in the TSS region: | 156620078 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000245564.6:1 uc001fky.5:1 BC002535:1 ENST00000471209.1:-4 uc057lqw.1:-4 ENST00000490743.5:-5 uc057lqv.1:-5 BX537684:-5 ENST00000460199.5:-7 uc057lqu.1:-7 ENST00000368341.8:17 ENST00000494995.5:17 uc057lqx.1:17 uc057lqy.1:17 AK001366:17 AK297140:17 AK056128:17 AK092950:17 ENST00000488901.5:-18 uc057lqt.1:-18 ENST00000482284.5:19 uc057lqz.1:19 ENST00000490642.5:20 uc057lra.1:20 CR749791:20 AK222863:20 CR936872:-24 AB587518:25 AM393003:25 EU832296:25 EU832380:25 AK309573:25 KJ894142:25 AK290610:-28 ENST00000491308.5:30 uc057lrb.1:30 NR_024117:-35 ENST00000483832.5:39 uc057lrc.1:39 NM_018116:-53 NM_001256533:-53 NM_001256532:-53 NR_046294:-53 NR_046293:-53 NR_046292:-53 NR_046295:-53 AF272833:68 ENST00000465137.5:88 uc057lrd.1:88 ENST00000473327.5:160 uc057lre.1:160 ENST00000483734.5:396 uc057lrf.1:396 AY334564:396 ENST00000478756.1:461 uc057lrg.1:461 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NR_024117 |
| Entrez ID: | 100129405 |
| Nearest Unigene: | Hs.656361 |
| Nearest Refseq: | NR_024117 |
| Nearest Ensembl: | |
| Gene Name: | MSTO2P |
| Gene Alias: | MSTO2 |
| Gene Description: | misato family member 2, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.11 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
