Difference between revisions of "TSS:Hg 233593.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AB208841:202 Z14227:482 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=202 |
| − | |distance_to_tss= | + | |distance_to_tss=234 |
|end=169795274 | |end=169795274 | ||
|end_of_center_position=72016157 | |end_of_center_position=72016157 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 1 open reading frame 112 | |gene_description=chromosome 1 open reading frame 112 | ||
| − | |gene_id= | + | |gene_id=4926 |
| − | |gene_name= | + | |gene_name=nuclear mitotic apparatus protein 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:8059 |
| − | |gene_symbol= | + | |gene_symbol=NUMA1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:8059 |
|nearest_ensembl=ENSG00000000460 | |nearest_ensembl=ENSG00000000460 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366768 |
|nearest_refseq=NM_018186 | |nearest_refseq=NM_018186 | ||
|nearest_unigene=Hs.443551 | |nearest_unigene=Hs.443551 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=169795273 | |start=169795273 | ||
|start_of_center_position=72016156 | |start_of_center_position=72016156 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB208841 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233593.1 | |tss_id=hg_233593.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q59HB8 |
}} | }} | ||
Revision as of 12:51, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72016156 |
|---|---|
| End of the center position in the TSS region: | 72016157 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB208841 |
|---|---|
| Distance: | 202 |
| Num_trans: | 2 |
| All_trans: | AB208841:202 Z14227:482 |
TATA-Box annotation
| Distance to TSS: | 234 |
|---|---|
| Nearest PromoterID: | NM_001366768 |
| Entrez ID: | 55732 |
| Nearest Unigene: | Hs.443551 |
| Nearest Refseq: | NM_018186 |
| Nearest Ensembl: | ENSG00000000460 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | - |
| Gene Description: | chromosome 1 open reading frame 112 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
