Difference between revisions of "TSS:Hg 233630.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PDE2A1= | |PDE2A1= | ||
|PED2A4= | |PED2A4= | ||
| − | |all_trans= | + | |all_trans=ENST00000532926.5:-33 AK097449:-33 ENST00000650027.1:224 ENST00000525597.5:240 NM_001351859:240 NM_001351861:240 NM_001351857:240 NM_001351858:240 AK293669:242 ENST00000529021.1:317 ENST00000533792.5:-392 CR749258:-392 |
|cGSPDE= | |cGSPDE= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-33 |
|distance_to_tss=-109 | |distance_to_tss=-109 | ||
|end=72669173 | |end=72669173 | ||
| Line 12: | Line 12: | ||
|entrez_id=5138 | |entrez_id=5138 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=CGS-PDE | + | |gene_alias=CGS-PDE{{!}}PDE2A1{{!}}PED2A4{{!}}cGSPDE |
|gene_description=phosphodiesterase 2A | |gene_description=phosphodiesterase 2A | ||
| − | |gene_id= | + | |gene_id=8495 |
| − | |gene_name= | + | |gene_name=PPFIA binding protein 2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:9250 |
| − | |gene_symbol= | + | |gene_symbol=PPFIBP2 |
| − | |gene_synonyms= | + | |gene_synonyms=Cclp1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:9250 |
|nearest_ensembl=ENSG00000186642 | |nearest_ensembl=ENSG00000186642 | ||
|nearest_promoter_id=NM_001146209 | |nearest_promoter_id=NM_001146209 | ||
|nearest_refseq=NM_002599 | |nearest_refseq=NM_002599 | ||
|nearest_unigene=Hs.503163 | |nearest_unigene=Hs.503163 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=72669172 | |start=72669172 | ||
|start_of_center_position=7576799 | |start_of_center_position=7576799 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000532926.5 AK097449 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233630.1 | |tss_id=hg_233630.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:52, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7576799 |
|---|---|
| End of the center position in the TSS region: | 7576800 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000532926.5 AK097449 |
|---|---|
| Distance: | -33 |
| Num_trans: | 12 |
| All_trans: | ENST00000532926.5:-33 AK097449:-33 ENST00000650027.1:224 ENST00000525597.5:240 NM_001351859:240 NM_001351861:240 NM_001351857:240 NM_001351858:240 AK293669:242 ENST00000529021.1:317 ENST00000533792.5:-392 CR749258:-392 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NM_001146209 |
| Entrez ID: | 5138 |
| Nearest Unigene: | Hs.503163 |
| Nearest Refseq: | NM_002599 |
| Nearest Ensembl: | ENSG00000186642 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | CGS-PDE|PDE2A1|PED2A4|cGSPDE |
| Gene Description: | phosphodiesterase 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
