Difference between revisions of "TSS:Hg 233656.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF320209:-9 MA555786:-9 LF320208:-170 MA555785:-170 ENST00000567904.1:388 BC039325:390 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=-9 |
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=7513753 | |end=7513753 | ||
| Line 12: | Line 12: | ||
|gene_description=PPFIA binding protein 2 | |gene_description=PPFIA binding protein 2 | ||
|gene_id=8495 | |gene_id=8495 | ||
| − | |gene_name= | + | |gene_name=PPFIBP2 |
|gene_source=HGNC:9250 | |gene_source=HGNC:9250 | ||
|gene_symbol=PPFIBP2 | |gene_symbol=PPFIBP2 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:9250 | |hgnc_mgi_id=HGNC:9250 | ||
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351853 |
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=7513752 | |start=7513752 | ||
|start_of_center_position=179954832 | |start_of_center_position=179954832 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF320209 MA555786 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233656.1 | |tss_id=hg_233656.1 | ||
Revision as of 12:52, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 179954832 |
|---|---|
| End of the center position in the TSS region: | 179954833 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF320209 MA555786 |
|---|---|
| Distance: | -9 |
| Num_trans: | 6 |
| All_trans: | LF320209:-9 MA555786:-9 LF320208:-170 MA555785:-170 ENST00000567904.1:388 BC039325:390 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001351853 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIBP2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
