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Difference between revisions of "TSS:Hg 233670.1"

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Line 5: Line 5:
 
|NSRD2=
 
|NSRD2=
 
|USH1B=
 
|USH1B=
 +
|all_trans=ENST00000524799.5:-57 ENST00000529271.5:77 AK021670:-137 ENST00000530060.5:-276
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
|distance=
+
|distance=-57
|distance_to_tss=46260
+
|distance_to_tss=46284
 
|end=77174530
 
|end=77174530
 
|end_of_center_position=8138502
 
|end_of_center_position=8138502
 
|entrez_id=4647
 
|entrez_id=4647
 
|gc_percent=0.557214
 
|gc_percent=0.557214
|gene_alias=DFNA11
+
|gene_alias=DFNA11{{!}}DFNB2{{!}}MYOVIIA{{!}}MYU7A{{!}}NSRD2{{!}}USH1B
 
|gene_description=myosin VIIA
 
|gene_description=myosin VIIA
|gene_name=MYO7A
+
|gene_id=79608
 +
|gene_name=RIC3 acetylcholine receptor chaperone
 +
|gene_source=HGNC:30338
 +
|gene_symbol=RIC3
 +
|gene_synonyms=AYST720 FLJ11608 PRO1385
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:30338
 
|nearest_ensembl=ENSG00000137474
 
|nearest_ensembl=ENSG00000137474
|nearest_promoter_id=NM_001127180
+
|nearest_promoter_id=NM_000260
 
|nearest_refseq=NM_000260
 
|nearest_refseq=NM_000260
 
|nearest_unigene=Hs.370421
 
|nearest_unigene=Hs.370421
|num_trans=0
+
|num_trans=4
 
|species=human
 
|species=human
 
|start=77174529
 
|start=77174529
 
|start_of_center_position=8138501
 
|start_of_center_position=8138501
 
|strand=+
 
|strand=+
|transcript_name=
+
|transcript_name=ENST00000524799.5
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_233670.1
 
|tss_id=hg_233670.1
 
|tss_score=1
 
|tss_score=1
 +
|uniprot_id=
 
}}
 
}}

Revision as of 12:53, 17 June 2021

Basic information about the TSS


TSS ID:hg_233670.1
Species:human
Chr:chr11
TSS Classification:no
Start:77174529
End:77174530
Strand:+
TSS Score:1
Start of the center position in the TSS region:8138501
End of the center position in the TSS region:8138502



Gene and protein annotation


Transcript_name:ENST00000524799.5
Distance:-57
GeneID:79608
HGNC/MGI_ID:HGNC:30338
UniProt_ID:
Gene_name:RIC3 acetylcholine receptor chaperone
Gene_symbol:RIC3
Gene_synonyms:AYST720 FLJ11608 PRO1385
Gene_source:HGNC:30338



Transcript annotation


Transcript_name:ENST00000524799.5
Distance:-57
Num_trans:4
All_trans:ENST00000524799.5:-57 ENST00000529271.5:77 AK021670:-137 ENST00000530060.5:-276



TATA-Box annotation


Distance to TSS:46284
Nearest PromoterID:NM_000260
Entrez ID:4647
Nearest Unigene:Hs.370421
Nearest Refseq:NM_000260
Nearest Ensembl:ENSG00000137474
Gene Name:RIC3 acetylcholine receptor chaperone
Gene Alias:DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B
Gene Description:myosin VIIA
Gene Type:protein-coding
CpG%:0.015
GC%:0.557214
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):