Difference between revisions of "TSS:Hg 233670.1"
From referenceTSS
| Line 5: | Line 5: | ||
|NSRD2= | |NSRD2= | ||
|USH1B= | |USH1B= | ||
| + | |all_trans=ENST00000524799.5:-57 ENST00000529271.5:77 AK021670:-137 ENST00000530060.5:-276 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-57 |
| − | |distance_to_tss= | + | |distance_to_tss=46284 |
|end=77174530 | |end=77174530 | ||
|end_of_center_position=8138502 | |end_of_center_position=8138502 | ||
|entrez_id=4647 | |entrez_id=4647 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=DFNA11 | + | |gene_alias=DFNA11{{!}}DFNB2{{!}}MYOVIIA{{!}}MYU7A{{!}}NSRD2{{!}}USH1B |
|gene_description=myosin VIIA | |gene_description=myosin VIIA | ||
| − | |gene_name= | + | |gene_id=79608 |
| + | |gene_name=RIC3 acetylcholine receptor chaperone | ||
| + | |gene_source=HGNC:30338 | ||
| + | |gene_symbol=RIC3 | ||
| + | |gene_synonyms=AYST720 FLJ11608 PRO1385 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30338 | ||
|nearest_ensembl=ENSG00000137474 | |nearest_ensembl=ENSG00000137474 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000260 |
|nearest_refseq=NM_000260 | |nearest_refseq=NM_000260 | ||
|nearest_unigene=Hs.370421 | |nearest_unigene=Hs.370421 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=77174529 | |start=77174529 | ||
|start_of_center_position=8138501 | |start_of_center_position=8138501 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000524799.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233670.1 | |tss_id=hg_233670.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:53, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8138501 |
|---|---|
| End of the center position in the TSS region: | 8138502 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000524799.5 |
|---|---|
| Distance: | -57 |
| Num_trans: | 4 |
| All_trans: | ENST00000524799.5:-57 ENST00000529271.5:77 AK021670:-137 ENST00000530060.5:-276 |
TATA-Box annotation
| Distance to TSS: | 46284 |
|---|---|
| Nearest PromoterID: | NM_000260 |
| Entrez ID: | 4647 |
| Nearest Unigene: | Hs.370421 |
| Nearest Refseq: | NM_000260 |
| Nearest Ensembl: | ENSG00000137474 |
| Gene Name: | RIC3 acetylcholine receptor chaperone |
| Gene Alias: | DFNA11|DFNB2|MYOVIIA|MYU7A|NSRD2|USH1B |
| Gene Description: | myosin VIIA |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
