Difference between revisions of "TSS:Hg 233701.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK023020:-89 ENST00000367497.1:91 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-89 |
|distance_to_tss=1106 | |distance_to_tss=1106 | ||
|end=812794 | |end=812794 | ||
| Line 9: | Line 10: | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=ACA52 | |gene_alias=ACA52 | ||
| − | |gene_description= | + | |gene_description=small nucleolar RNA, H/ACA box 52 |
| − | |gene_name= | + | |gene_id=10625 |
| + | |gene_name=influenza virus NS1A binding protein | ||
| + | |gene_source=HGNC:16951 | ||
| + | |gene_symbol=IVNS1ABP | ||
| + | |gene_synonyms=ARA3 HSPC068 KIAA0850 KLHL39 ND1 NS-1 NS1-BP | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| + | |hgnc_mgi_id=HGNC:16951 | ||
|nearest_ensembl=ENSG00000199785 | |nearest_ensembl=ENSG00000199785 | ||
|nearest_promoter_id=NR_002585 | |nearest_promoter_id=NR_002585 | ||
|nearest_refseq=NR_002585 | |nearest_refseq=NR_002585 | ||
|nearest_unigene=Hs.689713 | |nearest_unigene=Hs.689713 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=812780 | |start=812780 | ||
|start_of_center_position=185311217 | |start_of_center_position=185311217 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK023020 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233701.1 | |tss_id=hg_233701.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=B3KMY8 | ||
}} | }} | ||
Revision as of 12:53, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185311217 |
|---|---|
| End of the center position in the TSS region: | 185311218 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK023020 |
|---|---|
| Distance: | -89 |
| Num_trans: | 2 |
| All_trans: | AK023020:-89 ENST00000367497.1:91 |
TATA-Box annotation
| Distance to TSS: | 1106 |
|---|---|
| Nearest PromoterID: | NR_002585 |
| Entrez ID: | 619565 |
| Nearest Unigene: | Hs.689713 |
| Nearest Refseq: | NR_002585 |
| Nearest Ensembl: | ENSG00000199785 |
| Gene Name: | influenza virus NS1A binding protein |
| Gene Alias: | ACA52 |
| Gene Description: | small nucleolar RNA, H/ACA box 52 |
| Gene Type: | snoRNA |
| CpG%: | 0 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
