Difference between revisions of "TSS:Hg 233730.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GIG39= | |GIG39= | ||
|NIBAN= | |NIBAN= | ||
| + | |all_trans=ENST00000532825.5:-3 AK298323:-3 NM_001300995:-32 ENST00000424319.5:-37 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=-3 |
| − | |distance_to_tss= | + | |distance_to_tss=81 |
|end=184974428 | |end=184974428 | ||
|end_of_center_position=89492187 | |end_of_center_position=89492187 | ||
|entrez_id=116496 | |entrez_id=116496 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=C1orf24 | + | |gene_alias=C1orf24{{!}}FAM129A{{!}}GIG39{{!}}NIBAN |
| − | |gene_description= | + | |gene_description=niban apoptosis regulator 1 |
| − | |gene_name= | + | |gene_id=50507 |
| + | |gene_name=NADPH oxidase 4 | ||
| + | |gene_source=HGNC:7891 | ||
| + | |gene_symbol=NOX4 | ||
| + | |gene_synonyms=KOX KOX-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7891 | ||
|nearest_ensembl=ENSG00000135842 | |nearest_ensembl=ENSG00000135842 | ||
|nearest_promoter_id=NM_052966 | |nearest_promoter_id=NM_052966 | ||
|nearest_refseq=NM_052966 | |nearest_refseq=NM_052966 | ||
|nearest_unigene=Hs.518662 | |nearest_unigene=Hs.518662 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=184974426 | |start=184974426 | ||
|start_of_center_position=89492186 | |start_of_center_position=89492186 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000532825.5 AK298323 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233730.1 | |tss_id=hg_233730.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q9NPH5 | ||
}} | }} | ||
Revision as of 12:54, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89492186 |
|---|---|
| End of the center position in the TSS region: | 89492187 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000532825.5 AK298323 |
|---|---|
| Distance: | -3 |
| Num_trans: | 4 |
| All_trans: | ENST00000532825.5:-3 AK298323:-3 NM_001300995:-32 ENST00000424319.5:-37 |
TATA-Box annotation
| Distance to TSS: | 81 |
|---|---|
| Nearest PromoterID: | NM_052966 |
| Entrez ID: | 116496 |
| Nearest Unigene: | Hs.518662 |
| Nearest Refseq: | NM_052966 |
| Nearest Ensembl: | ENSG00000135842 |
| Gene Name: | NADPH oxidase 4 |
| Gene Alias: | C1orf24|FAM129A|GIG39|NIBAN |
| Gene Description: | niban apoptosis regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
