Difference between revisions of "TSS:Hg 234462.1"
From referenceTSS
| Line 8: | Line 8: | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=1521 |
|end=54282248 | |end=54282248 | ||
|end_of_center_position=56044129 | |end_of_center_position=56044129 | ||
|entrez_id=3178 | |entrez_id=3178 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=ALS19 | + | |gene_alias=ALS19{{!}}ALS20{{!}}HNRPA1{{!}}HNRPA1L3{{!}}IBMPFD3{{!}}UP 1{{!}}hnRNP A1{{!}}hnRNP-A1 |
|gene_description=heterogeneous nuclear ribonucleoprotein A1 | |gene_description=heterogeneous nuclear ribonucleoprotein A1 | ||
|gene_id=3178 | |gene_id=3178 | ||
| − | |gene_name= | + | |gene_name=HNRNPA1 |
|gene_source=HGNC:5031 | |gene_source=HGNC:5031 | ||
|gene_symbol=HNRNPA1 | |gene_symbol=HNRNPA1 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_002136 | |nearest_refseq=NM_002136 | ||
|nearest_unigene=Hs.546261 | |nearest_unigene=Hs.546261 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=54282245 | |start=54282245 | ||
|start_of_center_position=56044128 | |start_of_center_position=56044128 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_234462.1 | |tss_id=hg_234462.1 | ||
Revision as of 13:11, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 56044128 |
|---|---|
| End of the center position in the TSS region: | 56044129 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | BC104236:21 BC104237:21 ENST00000550482.1:-48 uc058ovu.1:-48 X04347:-63 BC035253:180 |
TATA-Box annotation
| Distance to TSS: | 1521 |
|---|---|
| Nearest PromoterID: | NM_002136 |
| Entrez ID: | 3178 |
| Nearest Unigene: | Hs.546261 |
| Nearest Refseq: | NM_002136 |
| Nearest Ensembl: | ENSG00000135486 |
| Gene Name: | HNRNPA1 |
| Gene Alias: | ALS19|ALS20|HNRPA1|HNRPA1L3|IBMPFD3|UP 1|hnRNP A1|hnRNP-A1 |
| Gene Description: | heterogeneous nuclear ribonucleoprotein A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
