Difference between revisions of "TSS:Hg 234504.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HG4-1= | |HG4-1= | ||
| − | |all_trans= | + | |all_trans=ENST00000550830.1:76 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=76 |
| − | |distance_to_tss= | + | |distance_to_tss=94 |
|end=56104663 | |end=56104663 | ||
|end_of_center_position=57966978 | |end_of_center_position=57966978 | ||
|entrez_id=5036 | |entrez_id=5036 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=EBP1 | + | |gene_alias=EBP1{{!}}HG4-1{{!}}p38-2G4 |
|gene_description=proliferation-associated 2G4 | |gene_description=proliferation-associated 2G4 | ||
|gene_id=5036 | |gene_id=5036 | ||
| − | |gene_name= | + | |gene_name=PA2G4 |
|gene_source=HGNC:8550 | |gene_source=HGNC:8550 | ||
|gene_symbol=PA2G4 | |gene_symbol=PA2G4 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006191 | |nearest_refseq=NM_006191 | ||
|nearest_unigene=Hs.524498 | |nearest_unigene=Hs.524498 | ||
| − | |num_trans= | + | |num_trans=1 |
|p38-2G4= | |p38-2G4= | ||
|species=human | |species=human | ||
| Line 29: | Line 29: | ||
|start_of_center_position=57966977 | |start_of_center_position=57966977 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000550830.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_234504.1 | |tss_id=hg_234504.1 | ||
Revision as of 13:12, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 57966977 |
|---|---|
| End of the center position in the TSS region: | 57966978 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000550830.1 |
|---|---|
| Distance: | 76 |
| Num_trans: | 1 |
| All_trans: | ENST00000550830.1:76 |
TATA-Box annotation
| Distance to TSS: | 94 |
|---|---|
| Nearest PromoterID: | NM_006191 |
| Entrez ID: | 5036 |
| Nearest Unigene: | Hs.524498 |
| Nearest Refseq: | NM_006191 |
| Nearest Ensembl: | ENSG00000170515 |
| Gene Name: | PA2G4 |
| Gene Alias: | EBP1|HG4-1|p38-2G4 |
| Gene Description: | proliferation-associated 2G4 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
