Difference between revisions of "TSS:Hg 23491.1"
From referenceTSS
Line 4: | Line 4: | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-7 | |distance=-7 | ||
− | |distance_to_tss= | + | |distance_to_tss=62874 |
|end=167250250 | |end=167250250 | ||
|end_of_center_position=167250247 | |end_of_center_position=167250247 | ||
Line 27: | Line 27: | ||
|start_of_center_position=167250246 | |start_of_center_position=167250246 | ||
|strand=+ | |strand=+ | ||
− | |tata_box= | + | |tata_box=-32(CCTTAAATATAG,+,0.00) |
|transcript_name=BC107799 | |transcript_name=BC107799 | ||
|tss_classification=yes | |tss_classification=yes |
Revision as of 13:21, 17 June 2021
Basic information about the TSS
|
|
Start of the center position in the TSS region: | 167250246 |
---|---|
End of the center position in the TSS region: | 167250247 |
Gene and protein annotation
|
|
Transcript annotation
Transcript_name: | BC107799 |
---|---|
Distance: | -7 |
Num_trans: | 4 |
All_trans: | BC107799:-7 BC070143:-91 AK056582:-167 AL832375:-477 |
TATA-Box annotation
Distance to TSS: | 62874 |
---|---|
Nearest PromoterID: | NM_001199145 |
Entrez ID: | 129446 |
Nearest Unigene: | Hs.73680 |
Nearest Refseq: | NM_152381 |
Nearest Ensembl: | ENSG00000163092 |
Gene Name: | xin actin binding repeat containing 2 |
Gene Alias: | CMYA3 |
Gene Description: | xin actin binding repeat containing 2 |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.378109 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CCTTAAATATAG,+,0.00) |