Difference between revisions of "TSS:Hg 23493.1"
From referenceTSS
| Line 4: | Line 4: | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-68 | |distance=-68 | ||
| − | |distance_to_tss= | + | |distance_to_tss=62938 |
|end=167250316 | |end=167250316 | ||
|end_of_center_position=167250310 | |end_of_center_position=167250310 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=167250309 | |start_of_center_position=167250309 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-96(CCTTAAATATAG,+,0.00) |
|transcript_name=BC107799 | |transcript_name=BC107799 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 13:21, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 167250309 |
|---|---|
| End of the center position in the TSS region: | 167250310 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC107799 |
|---|---|
| Distance: | -68 |
| Num_trans: | 3 |
| All_trans: | BC107799:-68 BC070143:-152 AK056582:-228 |
TATA-Box annotation
| Distance to TSS: | 62938 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | CMYA3 |
| Gene Description: | xin actin binding repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -96(CCTTAAATATAG,+,0.00) |
