Difference between revisions of "TSS:Hg 234967.1"
From referenceTSS
| Line 3: | Line 3: | ||
|DasraB= | |DasraB= | ||
|MESRGP= | |MESRGP= | ||
| + | |all_trans=NM_003576:21 ENST00000376547.7:148 AF083420:148 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=21 |
| − | |distance_to_tss= | + | |distance_to_tss=9252 |
|end=37701769 | |end=37701769 | ||
|end_of_center_position=98522146 | |end_of_center_position=98522146 | ||
|entrez_id=55143 | |entrez_id=55143 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=BOR | + | |gene_alias=BOR{{!}}BOREALIN{{!}}DasraB{{!}}MESRGP |
|gene_description=cell division cycle associated 8 | |gene_description=cell division cycle associated 8 | ||
| − | |gene_name= | + | |gene_id=8428 |
| + | |gene_name=serine/threonine kinase 24 | ||
| + | |gene_source=HGNC:11403 | ||
| + | |gene_symbol=STK24 | ||
| + | |gene_synonyms=MST-3 MST3 MST3B STE20 STK3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11403 | ||
|nearest_ensembl=ENSG00000134690 | |nearest_ensembl=ENSG00000134690 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_018101 |
|nearest_refseq=NM_018101 | |nearest_refseq=NM_018101 | ||
|nearest_unigene=Hs.524571 | |nearest_unigene=Hs.524571 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=37701767 | |start=37701767 | ||
|start_of_center_position=98522145 | |start_of_center_position=98522145 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=89(TTTTTTAAAGCA,+,0.00) |
| − | |transcript_name= | + | |transcript_name=NM_003576 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_234967.1 | |tss_id=hg_234967.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q9Y6E0 | ||
}} | }} | ||
Revision as of 13:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98522145 |
|---|---|
| End of the center position in the TSS region: | 98522146 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_003576 |
|---|---|
| Distance: | 21 |
| Num_trans: | 3 |
| All_trans: | NM_003576:21 ENST00000376547.7:148 AF083420:148 |
TATA-Box annotation
| Distance to TSS: | 9252 |
|---|---|
| Nearest PromoterID: | NM_018101 |
| Entrez ID: | 55143 |
| Nearest Unigene: | Hs.524571 |
| Nearest Refseq: | NM_018101 |
| Nearest Ensembl: | ENSG00000134690 |
| Gene Name: | serine/threonine kinase 24 |
| Gene Alias: | BOR|BOREALIN|DasraB|MESRGP |
| Gene Description: | cell division cycle associated 8 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 89(TTTTTTAAAGCA,+,0.00) |
